Protein–RNA interactions for Protein: P09025

Hoxc8, Homeobox protein Hox-C8, mousemouse

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc8P09025 Gm45841-201ENSMUST00000207700 164 ntBASIC15.02■□□□□ -0
Hoxc8P09025 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC15.02■□□□□ -0
Hoxc8P09025 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Hoxc8P09025 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Hoxc8P09025 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Hoxc8P09025 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC15.02■□□□□ -0
Hoxc8P09025 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC15.02■□□□□ -0
Hoxc8P09025 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Hoxc8P09025 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
Hoxc8P09025 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
Hoxc8P09025 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Hoxc8P09025 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Hoxc8P09025 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Hoxc8P09025 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Hoxc8P09025 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Hoxc8P09025 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Hoxc8P09025 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Hoxc8P09025 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Hoxc8P09025 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Hoxc8P09025 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC15.02□□□□□ -0.01
Hoxc8P09025 Ankra2-208ENSMUST00000226100 1476 ntBASIC15.01□□□□□ -0.01
Hoxc8P09025 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Hoxc8P09025 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Hoxc8P09025 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Hoxc8P09025 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Hoxc8P09025 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Hoxc8P09025 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Hoxc8P09025 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Hoxc8P09025 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Hoxc8P09025 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Hoxc8P09025 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Hoxc8P09025 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC15.01□□□□□ -0.01
Hoxc8P09025 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
Hoxc8P09025 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC15.01□□□□□ -0.01
Hoxc8P09025 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC15.01□□□□□ -0.01
Hoxc8P09025 AC140451.2-201ENSMUST00000228030 664 ntBASIC15.01□□□□□ -0.01
Hoxc8P09025 AC122459.1-201ENSMUST00000228373 885 ntBASIC15.01□□□□□ -0.01
Hoxc8P09025 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Hoxc8P09025 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC15.01□□□□□ -0.01
Hoxc8P09025 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Hoxc8P09025 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Hoxc8P09025 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Hoxc8P09025 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Hoxc8P09025 Fbxl12-205ENSMUST00000140702 1555 ntBASIC15.01□□□□□ -0.01
Hoxc8P09025 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Hoxc8P09025 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Hoxc8P09025 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC15.01□□□□□ -0.01
Hoxc8P09025 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Hoxc8P09025 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC15.01□□□□□ -0.01
Hoxc8P09025 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Hoxc8P09025 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Hoxc8P09025 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Hoxc8P09025 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC15.01□□□□□ -0.01
Hoxc8P09025 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Hoxc8P09025 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Hoxc8P09025 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Hoxc8P09025 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Hoxc8P09025 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC15□□□□□ -0.01
Hoxc8P09025 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC15□□□□□ -0.01
Hoxc8P09025 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Hoxc8P09025 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Hoxc8P09025 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Hoxc8P09025 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Hoxc8P09025 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Hoxc8P09025 Gm23931-201ENSMUST00000103842 109 ntBASIC15□□□□□ -0.01
Hoxc8P09025 Gm5687-201ENSMUST00000118252 640 ntBASIC15□□□□□ -0.01
Hoxc8P09025 Gm8062-201ENSMUST00000139696 444 ntBASIC15□□□□□ -0.01
Hoxc8P09025 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC15□□□□□ -0.01
Hoxc8P09025 Gm9728-201ENSMUST00000200197 1055 ntBASIC15□□□□□ -0.01
Hoxc8P09025 Gm38671-201ENSMUST00000200573 130 ntBASIC15□□□□□ -0.01
Hoxc8P09025 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC15□□□□□ -0.01
Hoxc8P09025 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Hoxc8P09025 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Hoxc8P09025 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC15□□□□□ -0.01
Hoxc8P09025 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Hoxc8P09025 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Hoxc8P09025 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Hoxc8P09025 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC15□□□□□ -0.01
Hoxc8P09025 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC15□□□□□ -0.01
Hoxc8P09025 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Hoxc8P09025 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Hoxc8P09025 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Hoxc8P09025 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Hoxc8P09025 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Hoxc8P09025 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Hoxc8P09025 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC14.99□□□□□ -0.01
Hoxc8P09025 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Hoxc8P09025 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Hoxc8P09025 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC14.99□□□□□ -0.01
Hoxc8P09025 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Hoxc8P09025 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC14.99□□□□□ -0.01
Hoxc8P09025 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Hoxc8P09025 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Hoxc8P09025 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Hoxc8P09025 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Hoxc8P09025 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC14.99□□□□□ -0.01
Hoxc8P09025 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Hoxc8P09025 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Hoxc8P09025 Gm11803-201ENSMUST00000119966 444 ntBASIC14.99□□□□□ -0.01
Hoxc8P09025 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms