Protein–RNA interactions for Protein: P08226

Apoe, Apolipoprotein E, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ApoeP08226 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
ApoeP08226 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ApoeP08226 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
ApoeP08226 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
ApoeP08226 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ApoeP08226 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
ApoeP08226 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
ApoeP08226 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ApoeP08226 Gm12500-202ENSMUST00000186471 2428 ntBASIC13.47□□□□□ -0.25
ApoeP08226 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
ApoeP08226 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
ApoeP08226 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
ApoeP08226 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
ApoeP08226 Gm18856-201ENSMUST00000178096 1374 ntBASIC13.46□□□□□ -0.25
ApoeP08226 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
ApoeP08226 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
ApoeP08226 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
ApoeP08226 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
ApoeP08226 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
ApoeP08226 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC13.46□□□□□ -0.25
ApoeP08226 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
ApoeP08226 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
ApoeP08226 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
ApoeP08226 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
ApoeP08226 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
ApoeP08226 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
ApoeP08226 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
ApoeP08226 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
ApoeP08226 Gm16026-204ENSMUST00000162652 683 ntBASIC13.46□□□□□ -0.25
ApoeP08226 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC13.46□□□□□ -0.25
ApoeP08226 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC13.46□□□□□ -0.25
ApoeP08226 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC13.46□□□□□ -0.25
ApoeP08226 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.25
ApoeP08226 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC13.46□□□□□ -0.25
ApoeP08226 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
ApoeP08226 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
ApoeP08226 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.26
ApoeP08226 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
ApoeP08226 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC13.46□□□□□ -0.26
ApoeP08226 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
ApoeP08226 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
ApoeP08226 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
ApoeP08226 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
ApoeP08226 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
ApoeP08226 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
ApoeP08226 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
ApoeP08226 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
ApoeP08226 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
ApoeP08226 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
ApoeP08226 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
ApoeP08226 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
ApoeP08226 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC13.45□□□□□ -0.26
ApoeP08226 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC13.45□□□□□ -0.26
ApoeP08226 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
ApoeP08226 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
ApoeP08226 Gm45098-201ENSMUST00000207179 657 ntBASIC13.45□□□□□ -0.26
ApoeP08226 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC13.45□□□□□ -0.26
ApoeP08226 Gm18041-201ENSMUST00000218210 618 ntBASIC13.45□□□□□ -0.26
ApoeP08226 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
ApoeP08226 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
ApoeP08226 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
ApoeP08226 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
ApoeP08226 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
ApoeP08226 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
ApoeP08226 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
ApoeP08226 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
ApoeP08226 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
ApoeP08226 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
ApoeP08226 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
ApoeP08226 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
ApoeP08226 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC13.45□□□□□ -0.26
ApoeP08226 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
ApoeP08226 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
ApoeP08226 Gm38094-201ENSMUST00000195864 2978 ntBASIC13.44□□□□□ -0.26
ApoeP08226 Gm14371-201ENSMUST00000138925 1518 ntBASIC13.44□□□□□ -0.26
ApoeP08226 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
ApoeP08226 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
ApoeP08226 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
ApoeP08226 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
ApoeP08226 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
ApoeP08226 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
ApoeP08226 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
ApoeP08226 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
ApoeP08226 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC13.44□□□□□ -0.26
ApoeP08226 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC13.44□□□□□ -0.26
ApoeP08226 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC13.44□□□□□ -0.26
ApoeP08226 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC13.44□□□□□ -0.26
ApoeP08226 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
ApoeP08226 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
ApoeP08226 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC13.44□□□□□ -0.26
ApoeP08226 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
ApoeP08226 AC154595.3-201ENSMUST00000224579 384 ntBASIC13.44□□□□□ -0.26
ApoeP08226 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
ApoeP08226 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC13.44□□□□□ -0.26
ApoeP08226 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
ApoeP08226 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
ApoeP08226 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
ApoeP08226 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC13.44□□□□□ -0.26
ApoeP08226 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
ApoeP08226 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms