Protein–RNA interactions for Protein: P04925

Prnp, Major prion protein, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrnpP04925 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
PrnpP04925 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PrnpP04925 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
PrnpP04925 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC14.67□□□□□ -0.06
PrnpP04925 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
PrnpP04925 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
PrnpP04925 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
PrnpP04925 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
PrnpP04925 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
PrnpP04925 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
PrnpP04925 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
PrnpP04925 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PrnpP04925 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PrnpP04925 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
PrnpP04925 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
PrnpP04925 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
PrnpP04925 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PrnpP04925 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
PrnpP04925 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PrnpP04925 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC14.66□□□□□ -0.06
PrnpP04925 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
PrnpP04925 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PrnpP04925 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PrnpP04925 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
PrnpP04925 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
PrnpP04925 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
PrnpP04925 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PrnpP04925 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC14.66□□□□□ -0.06
PrnpP04925 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
PrnpP04925 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
PrnpP04925 Gm12928-201ENSMUST00000117115 573 ntBASIC14.66□□□□□ -0.06
PrnpP04925 Gm12416-201ENSMUST00000120911 1008 ntBASIC14.66□□□□□ -0.06
PrnpP04925 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC14.66□□□□□ -0.06
PrnpP04925 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC14.66□□□□□ -0.06
PrnpP04925 Gm7287-201ENSMUST00000205267 602 ntBASIC14.66□□□□□ -0.06
PrnpP04925 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
PrnpP04925 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PrnpP04925 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PrnpP04925 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
PrnpP04925 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PrnpP04925 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PrnpP04925 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
PrnpP04925 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC14.65□□□□□ -0.06
PrnpP04925 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
PrnpP04925 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
PrnpP04925 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC14.65□□□□□ -0.06
PrnpP04925 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC14.65□□□□□ -0.06
PrnpP04925 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
PrnpP04925 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
PrnpP04925 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC14.65□□□□□ -0.06
PrnpP04925 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
PrnpP04925 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
PrnpP04925 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
PrnpP04925 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
PrnpP04925 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
PrnpP04925 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
PrnpP04925 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC14.65□□□□□ -0.06
PrnpP04925 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
PrnpP04925 Gm11814-201ENSMUST00000119515 929 ntBASIC14.65□□□□□ -0.06
PrnpP04925 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
PrnpP04925 Gm26464-201ENSMUST00000157094 305 ntBASIC14.65□□□□□ -0.06
PrnpP04925 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
PrnpP04925 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
PrnpP04925 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
PrnpP04925 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC14.65□□□□□ -0.06
PrnpP04925 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC14.65□□□□□ -0.06
PrnpP04925 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
PrnpP04925 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
PrnpP04925 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
PrnpP04925 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
PrnpP04925 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
PrnpP04925 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
PrnpP04925 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
PrnpP04925 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
PrnpP04925 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
PrnpP04925 Carlr-201ENSMUST00000181515 2574 ntBASIC14.65□□□□□ -0.06
PrnpP04925 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC14.65□□□□□ -0.06
PrnpP04925 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
PrnpP04925 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
PrnpP04925 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC14.65□□□□□ -0.06
PrnpP04925 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC14.65□□□□□ -0.07
PrnpP04925 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
PrnpP04925 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
PrnpP04925 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
PrnpP04925 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
PrnpP04925 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
PrnpP04925 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
PrnpP04925 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
PrnpP04925 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
PrnpP04925 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC14.64□□□□□ -0.07
PrnpP04925 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
PrnpP04925 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
PrnpP04925 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC14.64□□□□□ -0.07
PrnpP04925 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
PrnpP04925 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC14.64□□□□□ -0.07
PrnpP04925 Gm38230-201ENSMUST00000193572 1159 ntBASIC14.64□□□□□ -0.07
PrnpP04925 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
PrnpP04925 Gm6007-201ENSMUST00000208170 823 ntBASIC14.64□□□□□ -0.07
PrnpP04925 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
PrnpP04925 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC14.64□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms