Protein–RNA interactions for Protein: P04224

H-2 class II histocompatibility antigen, E-K alpha chain, mousemouse

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04224 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
P04224 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
P04224 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
P04224 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
P04224 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC12.5□□□□□ -0.41
P04224 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
P04224 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC12.5□□□□□ -0.41
P04224 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC12.5□□□□□ -0.41
P04224 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
P04224 Gm10305-201ENSMUST00000195331 2475 ntBASIC12.5□□□□□ -0.41
P04224 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
P04224 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
P04224 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC12.5□□□□□ -0.41
P04224 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
P04224 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC12.5□□□□□ -0.41
P04224 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC12.5□□□□□ -0.41
P04224 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
P04224 Gm27646-201ENSMUST00000183989 110 ntBASIC12.5□□□□□ -0.41
P04224 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC12.5□□□□□ -0.41
P04224 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC12.5□□□□□ -0.41
P04224 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
P04224 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
P04224 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
P04224 Gm18244-201ENSMUST00000219747 1566 ntBASIC12.5□□□□□ -0.41
P04224 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC12.5□□□□□ -0.41
P04224 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
P04224 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC12.5□□□□□ -0.41
P04224 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
P04224 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
P04224 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
P04224 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
P04224 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
P04224 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
P04224 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
P04224 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
P04224 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
P04224 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
P04224 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
P04224 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
P04224 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
P04224 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
P04224 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
P04224 Gm5422-201ENSMUST00000050717 2721 ntBASIC12.49□□□□□ -0.41
P04224 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
P04224 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
P04224 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
P04224 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
P04224 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
P04224 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
P04224 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
P04224 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
P04224 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
P04224 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
P04224 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
P04224 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
P04224 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
P04224 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC12.49□□□□□ -0.41
P04224 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC12.49□□□□□ -0.41
P04224 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC12.49□□□□□ -0.41
P04224 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
P04224 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC12.49□□□□□ -0.41
P04224 Gm6296-201ENSMUST00000222599 943 ntBASIC12.49□□□□□ -0.41
P04224 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
P04224 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC12.49□□□□□ -0.41
P04224 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
P04224 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
P04224 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC12.49□□□□□ -0.41
P04224 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
P04224 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
P04224 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
P04224 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC12.49□□□□□ -0.41
P04224 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
P04224 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
P04224 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
P04224 Gm37437-201ENSMUST00000194451 1937 ntBASIC12.49□□□□□ -0.41
P04224 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
P04224 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
P04224 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC12.48□□□□□ -0.41
P04224 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
P04224 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
P04224 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
P04224 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC12.48□□□□□ -0.41
P04224 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
P04224 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
P04224 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
P04224 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
P04224 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
P04224 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
P04224 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
P04224 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
P04224 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
P04224 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC12.48□□□□□ -0.41
P04224 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC12.48□□□□□ -0.41
P04224 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC12.48□□□□□ -0.41
P04224 Rbfox2-207ENSMUST00000227533 1041 ntBASIC12.48□□□□□ -0.41
P04224 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
P04224 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
P04224 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC12.48□□□□□ -0.41
P04224 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
P04224 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC12.48□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 75.3 ms