Protein–RNA interactions for Protein: P04104

Krt1, Keratin, type II cytoskeletal 1, mousemouse

Predictions only

Length 637 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt1P04104 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC13.43□□□□□ -0.26
Krt1P04104 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Krt1P04104 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Krt1P04104 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Krt1P04104 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Krt1P04104 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Krt1P04104 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Krt1P04104 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Krt1P04104 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC13.43□□□□□ -0.26
Krt1P04104 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Krt1P04104 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Krt1P04104 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Krt1P04104 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC13.43□□□□□ -0.26
Krt1P04104 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Krt1P04104 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Krt1P04104 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC13.43□□□□□ -0.26
Krt1P04104 AC153881.2-201ENSMUST00000214877 204 ntBASIC13.43□□□□□ -0.26
Krt1P04104 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Krt1P04104 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Krt1P04104 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Krt1P04104 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC13.43□□□□□ -0.26
Krt1P04104 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
Krt1P04104 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Krt1P04104 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Krt1P04104 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Krt1P04104 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Krt1P04104 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Krt1P04104 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Krt1P04104 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Krt1P04104 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Krt1P04104 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Krt1P04104 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Krt1P04104 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Krt1P04104 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Krt1P04104 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Krt1P04104 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Krt1P04104 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Krt1P04104 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Krt1P04104 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Krt1P04104 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Krt1P04104 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Krt1P04104 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Krt1P04104 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Krt1P04104 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Krt1P04104 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Krt1P04104 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Krt1P04104 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Krt1P04104 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Krt1P04104 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC13.42□□□□□ -0.26
Krt1P04104 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC13.42□□□□□ -0.26
Krt1P04104 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC13.42□□□□□ -0.26
Krt1P04104 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Krt1P04104 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Krt1P04104 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC13.42□□□□□ -0.26
Krt1P04104 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC13.42□□□□□ -0.26
Krt1P04104 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC13.42□□□□□ -0.26
Krt1P04104 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC13.42□□□□□ -0.26
Krt1P04104 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC13.42□□□□□ -0.26
Krt1P04104 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Krt1P04104 Gm37133-201ENSMUST00000192705 1922 ntBASIC13.42□□□□□ -0.26
Krt1P04104 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Krt1P04104 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Krt1P04104 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Krt1P04104 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Krt1P04104 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Krt1P04104 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Krt1P04104 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Krt1P04104 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Krt1P04104 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC13.41□□□□□ -0.26
Krt1P04104 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC13.41□□□□□ -0.26
Krt1P04104 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Krt1P04104 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Krt1P04104 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC13.41□□□□□ -0.26
Krt1P04104 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Krt1P04104 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC13.41□□□□□ -0.26
Krt1P04104 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Krt1P04104 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
Krt1P04104 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Krt1P04104 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Krt1P04104 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Krt1P04104 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Krt1P04104 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Krt1P04104 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Krt1P04104 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Krt1P04104 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Krt1P04104 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC13.41□□□□□ -0.26
Krt1P04104 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Krt1P04104 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Krt1P04104 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Krt1P04104 Gm8097-201ENSMUST00000117903 829 ntBASIC13.41□□□□□ -0.26
Krt1P04104 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Krt1P04104 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Krt1P04104 Gm18489-201ENSMUST00000172565 551 ntBASIC13.41□□□□□ -0.26
Krt1P04104 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC13.41□□□□□ -0.26
Krt1P04104 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC13.41□□□□□ -0.26
Krt1P04104 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Krt1P04104 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Krt1P04104 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Krt1P04104 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Krt1P04104 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms