Protein–RNA interactions for Protein: P02463

Col4a1, Collagen alpha-1(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1P02463 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Col4a1P02463 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC17.16■□□□□ 0.34
Col4a1P02463 Gm44974-201ENSMUST00000206387 1279 ntBASIC17.16■□□□□ 0.34
Col4a1P02463 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Col4a1P02463 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC17.16■□□□□ 0.34
Col4a1P02463 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Col4a1P02463 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Col4a1P02463 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Col4a1P02463 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Col4a1P02463 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Col4a1P02463 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Col4a1P02463 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Col4a1P02463 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Col4a1P02463 Gm8337-201ENSMUST00000187358 1938 ntBASIC17.16■□□□□ 0.34
Col4a1P02463 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Col4a1P02463 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Col4a1P02463 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC17.16■□□□□ 0.34
Col4a1P02463 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Col4a1P02463 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Col4a1P02463 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Col4a1P02463 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC17.16■□□□□ 0.34
Col4a1P02463 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Col4a1P02463 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Col4a1P02463 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Col4a1P02463 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Col4a1P02463 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Col4a1P02463 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Col4a1P02463 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC17.16■□□□□ 0.34
Col4a1P02463 Gm45133-201ENSMUST00000207548 2773 ntBASIC17.16■□□□□ 0.34
Col4a1P02463 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Col4a1P02463 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Col4a1P02463 Mir698-201ENSMUST00000102164 109 ntBASIC17.16■□□□□ 0.34
Col4a1P02463 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
Col4a1P02463 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC17.16■□□□□ 0.34
Col4a1P02463 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Col4a1P02463 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
Col4a1P02463 Gm43179-201ENSMUST00000198797 275 ntBASIC17.16■□□□□ 0.34
Col4a1P02463 Gm18934-201ENSMUST00000216671 1044 ntBASIC17.16■□□□□ 0.34
Col4a1P02463 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC17.16■□□□□ 0.34
Col4a1P02463 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Col4a1P02463 Gm24447-201ENSMUST00000083977 338 ntBASIC17.16■□□□□ 0.34
Col4a1P02463 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Col4a1P02463 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Col4a1P02463 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC17.15■□□□□ 0.34
Col4a1P02463 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Col4a1P02463 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Col4a1P02463 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Col4a1P02463 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC17.15■□□□□ 0.34
Col4a1P02463 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Col4a1P02463 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Col4a1P02463 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Col4a1P02463 Gm5687-201ENSMUST00000118252 640 ntBASIC17.15■□□□□ 0.34
Col4a1P02463 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC17.15■□□□□ 0.34
Col4a1P02463 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Col4a1P02463 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC17.15■□□□□ 0.34
Col4a1P02463 Gm4271-201ENSMUST00000174444 973 ntBASIC17.15■□□□□ 0.34
Col4a1P02463 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC17.15■□□□□ 0.34
Col4a1P02463 Gm38319-201ENSMUST00000194537 1266 ntBASIC17.15■□□□□ 0.34
Col4a1P02463 Gm45504-201ENSMUST00000211407 2107 ntBASIC17.15■□□□□ 0.34
Col4a1P02463 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Col4a1P02463 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Col4a1P02463 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Col4a1P02463 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Col4a1P02463 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Col4a1P02463 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Col4a1P02463 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Col4a1P02463 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Col4a1P02463 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC17.15■□□□□ 0.34
Col4a1P02463 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Col4a1P02463 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Col4a1P02463 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC17.14■□□□□ 0.34
Col4a1P02463 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.34
Col4a1P02463 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Col4a1P02463 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Col4a1P02463 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC17.14■□□□□ 0.33
Col4a1P02463 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Col4a1P02463 Gm29649-201ENSMUST00000185649 419 ntBASIC17.14■□□□□ 0.33
Col4a1P02463 Gm45930-201ENSMUST00000221330 292 ntBASIC17.14■□□□□ 0.33
Col4a1P02463 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Col4a1P02463 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Col4a1P02463 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Col4a1P02463 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Col4a1P02463 Gm11960-202ENSMUST00000181063 2858 ntBASIC17.14■□□□□ 0.33
Col4a1P02463 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Col4a1P02463 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Col4a1P02463 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Col4a1P02463 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Col4a1P02463 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Col4a1P02463 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Col4a1P02463 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Col4a1P02463 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Col4a1P02463 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Col4a1P02463 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC17.13■□□□□ 0.33
Col4a1P02463 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Col4a1P02463 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Col4a1P02463 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Col4a1P02463 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC17.13■□□□□ 0.33
Col4a1P02463 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC17.13■□□□□ 0.33
Col4a1P02463 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC17.13■□□□□ 0.33
Col4a1P02463 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms