Protein–RNA interactions for Protein: P01758

Igh-VJ558, Ig heavy chain V region 108A, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igh-VJ558P01758 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
Igh-VJ558P01758 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC12.3□□□□□ -0.44
Igh-VJ558P01758 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Igh-VJ558P01758 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Igh-VJ558P01758 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Igh-VJ558P01758 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Igh-VJ558P01758 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC12.3□□□□□ -0.44
Igh-VJ558P01758 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Igh-VJ558P01758 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Igh-VJ558P01758 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Igh-VJ558P01758 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Igh-VJ558P01758 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Igh-VJ558P01758 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Igh-VJ558P01758 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Igh-VJ558P01758 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Igh-VJ558P01758 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Igh-VJ558P01758 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Igh-VJ558P01758 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Igh-VJ558P01758 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Igh-VJ558P01758 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC12.3□□□□□ -0.44
Igh-VJ558P01758 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Igh-VJ558P01758 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC12.3□□□□□ -0.44
Igh-VJ558P01758 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Igh-VJ558P01758 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC12.3□□□□□ -0.44
Igh-VJ558P01758 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Igh-VJ558P01758 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Igh-VJ558P01758 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC12.3□□□□□ -0.44
Igh-VJ558P01758 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC12.3□□□□□ -0.44
Igh-VJ558P01758 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Igh-VJ558P01758 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Igh-VJ558P01758 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Igh-VJ558P01758 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Igh-VJ558P01758 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Igh-VJ558P01758 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Igh-VJ558P01758 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Igh-VJ558P01758 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Igh-VJ558P01758 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Igh-VJ558P01758 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Igh-VJ558P01758 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC12.3□□□□□ -0.44
Igh-VJ558P01758 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Igh-VJ558P01758 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC12.3□□□□□ -0.44
Igh-VJ558P01758 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC12.3□□□□□ -0.44
Igh-VJ558P01758 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Igh-VJ558P01758 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Igh-VJ558P01758 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Igh-VJ558P01758 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC12.29□□□□□ -0.44
Igh-VJ558P01758 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Igh-VJ558P01758 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Igh-VJ558P01758 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC12.29□□□□□ -0.44
Igh-VJ558P01758 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Igh-VJ558P01758 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Igh-VJ558P01758 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC12.29□□□□□ -0.44
Igh-VJ558P01758 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Igh-VJ558P01758 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Igh-VJ558P01758 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC12.29□□□□□ -0.44
Igh-VJ558P01758 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC12.29□□□□□ -0.44
Igh-VJ558P01758 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Igh-VJ558P01758 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Igh-VJ558P01758 Gm9719-201ENSMUST00000162765 543 ntBASIC12.29□□□□□ -0.44
Igh-VJ558P01758 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC12.29□□□□□ -0.44
Igh-VJ558P01758 Gm2756-201ENSMUST00000195851 400 ntBASIC12.29□□□□□ -0.44
Igh-VJ558P01758 Ighv8-14-201ENSMUST00000196781 358 ntBASIC12.29□□□□□ -0.44
Igh-VJ558P01758 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC12.29□□□□□ -0.44
Igh-VJ558P01758 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Igh-VJ558P01758 AC132104.2-201ENSMUST00000215011 266 ntBASIC12.29□□□□□ -0.44
Igh-VJ558P01758 AC139350.3-201ENSMUST00000226151 420 ntBASIC12.29□□□□□ -0.44
Igh-VJ558P01758 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC12.29□□□□□ -0.44
Igh-VJ558P01758 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Igh-VJ558P01758 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Igh-VJ558P01758 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Igh-VJ558P01758 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Igh-VJ558P01758 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Igh-VJ558P01758 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Igh-VJ558P01758 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC12.29□□□□□ -0.44
Igh-VJ558P01758 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Igh-VJ558P01758 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Igh-VJ558P01758 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Igh-VJ558P01758 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC12.29□□□□□ -0.44
Igh-VJ558P01758 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Igh-VJ558P01758 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Igh-VJ558P01758 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC12.29□□□□□ -0.44
Igh-VJ558P01758 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Igh-VJ558P01758 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Igh-VJ558P01758 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Igh-VJ558P01758 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC12.28□□□□□ -0.44
Igh-VJ558P01758 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Igh-VJ558P01758 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Igh-VJ558P01758 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Igh-VJ558P01758 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Igh-VJ558P01758 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Igh-VJ558P01758 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC12.28□□□□□ -0.44
Igh-VJ558P01758 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Igh-VJ558P01758 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC12.28□□□□□ -0.44
Igh-VJ558P01758 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Igh-VJ558P01758 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Igh-VJ558P01758 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Igh-VJ558P01758 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
Igh-VJ558P01758 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Igh-VJ558P01758 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Igh-VJ558P01758 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC12.28□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms