Protein–RNA interactions for Protein: P01572

Ifna1, Interferon alpha-1, mousemouse

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ifna1P01572 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC12.01□□□□□ -0.49
Ifna1P01572 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Ifna1P01572 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Ifna1P01572 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Ifna1P01572 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC12.01□□□□□ -0.49
Ifna1P01572 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Ifna1P01572 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
Ifna1P01572 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ifna1P01572 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC12.01□□□□□ -0.49
Ifna1P01572 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ifna1P01572 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Ifna1P01572 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Ifna1P01572 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ifna1P01572 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ifna1P01572 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC12□□□□□ -0.49
Ifna1P01572 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ifna1P01572 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Ifna1P01572 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC12□□□□□ -0.49
Ifna1P01572 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC12□□□□□ -0.49
Ifna1P01572 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ifna1P01572 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Ifna1P01572 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC12□□□□□ -0.49
Ifna1P01572 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ifna1P01572 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ifna1P01572 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ifna1P01572 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC12□□□□□ -0.49
Ifna1P01572 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Ifna1P01572 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ifna1P01572 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ifna1P01572 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC12□□□□□ -0.49
Ifna1P01572 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC12□□□□□ -0.49
Ifna1P01572 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Ifna1P01572 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Ifna1P01572 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ifna1P01572 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC12□□□□□ -0.49
Ifna1P01572 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ifna1P01572 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC12□□□□□ -0.49
Ifna1P01572 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Ifna1P01572 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ifna1P01572 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC12□□□□□ -0.49
Ifna1P01572 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ifna1P01572 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Ifna1P01572 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ifna1P01572 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ifna1P01572 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ifna1P01572 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC11.99□□□□□ -0.49
Ifna1P01572 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ifna1P01572 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ifna1P01572 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Ifna1P01572 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ifna1P01572 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ifna1P01572 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ifna1P01572 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Ifna1P01572 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ifna1P01572 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC11.99□□□□□ -0.49
Ifna1P01572 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC11.99□□□□□ -0.49
Ifna1P01572 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC11.99□□□□□ -0.49
Ifna1P01572 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ifna1P01572 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Ifna1P01572 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC11.99□□□□□ -0.49
Ifna1P01572 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC11.99□□□□□ -0.49
Ifna1P01572 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Ifna1P01572 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Ifna1P01572 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ifna1P01572 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Ifna1P01572 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Ifna1P01572 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ifna1P01572 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ifna1P01572 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ifna1P01572 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ifna1P01572 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC11.99□□□□□ -0.49
Ifna1P01572 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ifna1P01572 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ifna1P01572 Rubie-203ENSMUST00000227803 2430 ntBASIC11.99□□□□□ -0.49
Ifna1P01572 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ifna1P01572 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ifna1P01572 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ifna1P01572 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ifna1P01572 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC11.99□□□□□ -0.49
Ifna1P01572 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ifna1P01572 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ifna1P01572 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ifna1P01572 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC11.98□□□□□ -0.49
Ifna1P01572 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Ifna1P01572 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ifna1P01572 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ifna1P01572 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ifna1P01572 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ifna1P01572 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ifna1P01572 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Ifna1P01572 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC11.98□□□□□ -0.49
Ifna1P01572 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Ifna1P01572 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Ifna1P01572 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ifna1P01572 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Ifna1P01572 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ifna1P01572 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC11.98□□□□□ -0.49
Ifna1P01572 Birc2-201ENSMUST00000054878 378 ntBASIC11.98□□□□□ -0.49
Ifna1P01572 Rps4l-201ENSMUST00000071745 943 ntBASIC11.98□□□□□ -0.49
Ifna1P01572 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 59.5 ms