Protein–RNA interactions for Protein: O88935

Syn1, Synapsin-1, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syn1O88935 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Syn1O88935 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Syn1O88935 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC14.6□□□□□ -0.07
Syn1O88935 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Syn1O88935 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Syn1O88935 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Syn1O88935 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Syn1O88935 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Syn1O88935 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Syn1O88935 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Syn1O88935 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Syn1O88935 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Syn1O88935 Sybu-209ENSMUST00000228639 4113 ntBASIC14.59□□□□□ -0.07
Syn1O88935 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Syn1O88935 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Syn1O88935 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC14.59□□□□□ -0.07
Syn1O88935 Gm42791-202ENSMUST00000147473 727 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Syn1O88935 Gm2639-201ENSMUST00000156881 1297 ntBASIC14.59□□□□□ -0.07
Syn1O88935 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC14.59□□□□□ -0.07
Syn1O88935 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Syn1O88935 Gm21470-201ENSMUST00000187680 696 ntBASIC14.59□□□□□ -0.07
Syn1O88935 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC14.59□□□□□ -0.07
Syn1O88935 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Syn1O88935 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Syn1O88935 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Syn1O88935 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Syn1O88935 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Syn1O88935 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Syn1O88935 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Syn1O88935 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Syn1O88935 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Syn1O88935 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Syn1O88935 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Syn1O88935 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Syn1O88935 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Syn1O88935 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Syn1O88935 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Syn1O88935 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Syn1O88935 Gm45546-201ENSMUST00000211053 2394 ntBASIC14.58□□□□□ -0.08
Syn1O88935 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Syn1O88935 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Syn1O88935 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Syn1O88935 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC14.58□□□□□ -0.08
Syn1O88935 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Syn1O88935 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Syn1O88935 Gm43068-201ENSMUST00000201095 1273 ntBASIC14.58□□□□□ -0.08
Syn1O88935 AC134335.2-201ENSMUST00000227660 440 ntBASIC14.58□□□□□ -0.08
Syn1O88935 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Syn1O88935 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Syn1O88935 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Syn1O88935 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Syn1O88935 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Syn1O88935 Gm13050-201ENSMUST00000122149 1345 ntBASIC14.58□□□□□ -0.08
Syn1O88935 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Syn1O88935 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Syn1O88935 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Syn1O88935 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Syn1O88935 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Syn1O88935 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Syn1O88935 Gm7553-201ENSMUST00000185805 1426 ntBASIC14.58□□□□□ -0.08
Syn1O88935 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Syn1O88935 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Syn1O88935 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Syn1O88935 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Syn1O88935 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Syn1O88935 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
Syn1O88935 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Syn1O88935 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Syn1O88935 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Syn1O88935 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC14.57□□□□□ -0.08
Syn1O88935 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC14.57□□□□□ -0.08
Syn1O88935 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC14.57□□□□□ -0.08
Syn1O88935 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC14.57□□□□□ -0.08
Syn1O88935 Gm12176-201ENSMUST00000121420 875 ntBASIC14.57□□□□□ -0.08
Syn1O88935 Gm24644-201ENSMUST00000157114 139 ntBASIC14.57□□□□□ -0.08
Syn1O88935 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Syn1O88935 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Syn1O88935 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Syn1O88935 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC14.57□□□□□ -0.08
Syn1O88935 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC14.57□□□□□ -0.08
Syn1O88935 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
Syn1O88935 Gm19184-201ENSMUST00000196798 928 ntBASIC14.57□□□□□ -0.08
Syn1O88935 Gm38671-201ENSMUST00000200573 130 ntBASIC14.57□□□□□ -0.08
Syn1O88935 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC14.57□□□□□ -0.08
Syn1O88935 Gm9176-201ENSMUST00000219955 1120 ntBASIC14.57□□□□□ -0.08
Syn1O88935 Gm45930-201ENSMUST00000221330 292 ntBASIC14.57□□□□□ -0.08
Syn1O88935 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Syn1O88935 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Syn1O88935 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Syn1O88935 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Syn1O88935 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Syn1O88935 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Syn1O88935 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Syn1O88935 Gm7993-201ENSMUST00000200970 1384 ntBASIC14.57□□□□□ -0.08
Syn1O88935 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Syn1O88935 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Syn1O88935 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Syn1O88935 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Syn1O88935 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Syn1O88935 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC14.56□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms