Protein–RNA interactions for Protein: O88696

Clpp, ATP-dependent Clp protease proteolytic subunit, mitochondrial, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClppO88696 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
ClppO88696 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ClppO88696 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
ClppO88696 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ClppO88696 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ClppO88696 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC13.92□□□□□ -0.18
ClppO88696 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ClppO88696 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC13.92□□□□□ -0.18
ClppO88696 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ClppO88696 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
ClppO88696 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
ClppO88696 Gm27437-201ENSMUST00000183429 107 ntBASIC13.92□□□□□ -0.18
ClppO88696 Gm17837-201ENSMUST00000186435 985 ntBASIC13.92□□□□□ -0.18
ClppO88696 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC13.92□□□□□ -0.18
ClppO88696 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
ClppO88696 Gm18766-201ENSMUST00000189811 808 ntBASIC13.92□□□□□ -0.18
ClppO88696 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
ClppO88696 Gm37277-201ENSMUST00000194052 1111 ntBASIC13.92□□□□□ -0.18
ClppO88696 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC13.92□□□□□ -0.18
ClppO88696 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
ClppO88696 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ClppO88696 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
ClppO88696 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
ClppO88696 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
ClppO88696 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
ClppO88696 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ClppO88696 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
ClppO88696 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
ClppO88696 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ClppO88696 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ClppO88696 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC13.92□□□□□ -0.18
ClppO88696 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC13.92□□□□□ -0.18
ClppO88696 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ClppO88696 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
ClppO88696 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC13.92□□□□□ -0.18
ClppO88696 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
ClppO88696 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC13.91□□□□□ -0.18
ClppO88696 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC13.91□□□□□ -0.18
ClppO88696 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
ClppO88696 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC13.91□□□□□ -0.18
ClppO88696 Gm45053-201ENSMUST00000206112 2499 ntBASIC13.91□□□□□ -0.18
ClppO88696 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
ClppO88696 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
ClppO88696 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
ClppO88696 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
ClppO88696 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
ClppO88696 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
ClppO88696 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC13.91□□□□□ -0.18
ClppO88696 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
ClppO88696 Gm27680-201ENSMUST00000184192 160 ntBASIC13.91□□□□□ -0.18
ClppO88696 Klk2-ps-201ENSMUST00000205342 571 ntBASIC13.91□□□□□ -0.18
ClppO88696 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC13.91□□□□□ -0.18
ClppO88696 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC13.91□□□□□ -0.18
ClppO88696 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
ClppO88696 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
ClppO88696 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC13.91□□□□□ -0.18
ClppO88696 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
ClppO88696 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
ClppO88696 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
ClppO88696 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
ClppO88696 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
ClppO88696 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
ClppO88696 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC13.91□□□□□ -0.18
ClppO88696 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
ClppO88696 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
ClppO88696 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
ClppO88696 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
ClppO88696 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
ClppO88696 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
ClppO88696 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
ClppO88696 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
ClppO88696 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC13.9□□□□□ -0.18
ClppO88696 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
ClppO88696 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
ClppO88696 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
ClppO88696 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
ClppO88696 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
ClppO88696 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
ClppO88696 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
ClppO88696 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
ClppO88696 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
ClppO88696 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
ClppO88696 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
ClppO88696 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
ClppO88696 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
ClppO88696 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
ClppO88696 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC13.9□□□□□ -0.18
ClppO88696 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
ClppO88696 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
ClppO88696 Gm5479-201ENSMUST00000160578 435 ntBASIC13.9□□□□□ -0.18
ClppO88696 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
ClppO88696 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
ClppO88696 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC13.9□□□□□ -0.18
ClppO88696 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC13.9□□□□□ -0.18
ClppO88696 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
ClppO88696 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
ClppO88696 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
ClppO88696 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
ClppO88696 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
ClppO88696 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 66.4 ms