Protein–RNA interactions for Protein: O88609

Lmx1b, LIM homeobox transcription factor 1-beta, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmx1bO88609 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Lmx1bO88609 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Lmx1bO88609 Gm5320-201ENSMUST00000207163 1519 ntBASIC12.91□□□□□ -0.34
Lmx1bO88609 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Lmx1bO88609 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Lmx1bO88609 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Lmx1bO88609 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Lmx1bO88609 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Lmx1bO88609 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC12.91□□□□□ -0.34
Lmx1bO88609 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC12.91□□□□□ -0.34
Lmx1bO88609 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Lmx1bO88609 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Lmx1bO88609 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Lmx1bO88609 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC12.9□□□□□ -0.34
Lmx1bO88609 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Lmx1bO88609 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Lmx1bO88609 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Lmx1bO88609 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Lmx1bO88609 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Lmx1bO88609 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Lmx1bO88609 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Lmx1bO88609 Gm14719-201ENSMUST00000121891 340 ntBASIC12.9□□□□□ -0.34
Lmx1bO88609 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC12.9□□□□□ -0.34
Lmx1bO88609 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Lmx1bO88609 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Lmx1bO88609 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Lmx1bO88609 Gm44855-201ENSMUST00000205725 362 ntBASIC12.9□□□□□ -0.34
Lmx1bO88609 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Lmx1bO88609 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC12.9□□□□□ -0.34
Lmx1bO88609 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC12.9□□□□□ -0.34
Lmx1bO88609 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Lmx1bO88609 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Lmx1bO88609 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Lmx1bO88609 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Lmx1bO88609 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Lmx1bO88609 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Lmx1bO88609 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
Lmx1bO88609 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Lmx1bO88609 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.35
Lmx1bO88609 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.35
Lmx1bO88609 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Lmx1bO88609 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Lmx1bO88609 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Lmx1bO88609 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Lmx1bO88609 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Lmx1bO88609 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Lmx1bO88609 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Lmx1bO88609 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Lmx1bO88609 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Lmx1bO88609 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Lmx1bO88609 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Lmx1bO88609 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Lmx1bO88609 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Lmx1bO88609 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Lmx1bO88609 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Lmx1bO88609 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Lmx1bO88609 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC12.89□□□□□ -0.35
Lmx1bO88609 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Lmx1bO88609 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC12.89□□□□□ -0.35
Lmx1bO88609 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Lmx1bO88609 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Lmx1bO88609 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC12.89□□□□□ -0.35
Lmx1bO88609 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Lmx1bO88609 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC12.89□□□□□ -0.35
Lmx1bO88609 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Lmx1bO88609 Gm16476-201ENSMUST00000221544 139 ntBASIC12.89□□□□□ -0.35
Lmx1bO88609 AC132863.2-201ENSMUST00000226643 799 ntBASIC12.89□□□□□ -0.35
Lmx1bO88609 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Lmx1bO88609 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Lmx1bO88609 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC12.89□□□□□ -0.35
Lmx1bO88609 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC12.89□□□□□ -0.35
Lmx1bO88609 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Lmx1bO88609 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Lmx1bO88609 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Lmx1bO88609 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Lmx1bO88609 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Lmx1bO88609 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC12.89□□□□□ -0.35
Lmx1bO88609 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Lmx1bO88609 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Lmx1bO88609 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Lmx1bO88609 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC12.89□□□□□ -0.35
Lmx1bO88609 Gm43205-201ENSMUST00000198622 1968 ntBASIC12.89□□□□□ -0.35
Lmx1bO88609 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
Lmx1bO88609 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Lmx1bO88609 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Lmx1bO88609 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC12.88□□□□□ -0.35
Lmx1bO88609 Syt7-204ENSMUST00000223586 1344 ntBASIC12.88□□□□□ -0.35
Lmx1bO88609 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lmx1bO88609 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lmx1bO88609 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lmx1bO88609 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lmx1bO88609 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lmx1bO88609 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lmx1bO88609 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC12.88□□□□□ -0.35
Lmx1bO88609 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lmx1bO88609 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lmx1bO88609 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lmx1bO88609 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC12.88□□□□□ -0.35
Lmx1bO88609 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lmx1bO88609 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms