Protein–RNA interactions for Protein: O88545

Cops6, COP9 signalosome complex subunit 6, mousemouse

Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops6O88545 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cops6O88545 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cops6O88545 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC17.29■□□□□ 0.36
Cops6O88545 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC17.29■□□□□ 0.36
Cops6O88545 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
Cops6O88545 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
Cops6O88545 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Cops6O88545 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cops6O88545 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cops6O88545 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cops6O88545 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Cops6O88545 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cops6O88545 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cops6O88545 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Cops6O88545 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC17.29■□□□□ 0.36
Cops6O88545 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Cops6O88545 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cops6O88545 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC17.29■□□□□ 0.36
Cops6O88545 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Cops6O88545 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cops6O88545 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Cops6O88545 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cops6O88545 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cops6O88545 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cops6O88545 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Cops6O88545 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cops6O88545 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cops6O88545 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Cops6O88545 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cops6O88545 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cops6O88545 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cops6O88545 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cops6O88545 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cops6O88545 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cops6O88545 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Cops6O88545 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cops6O88545 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Cops6O88545 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cops6O88545 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC17.28■□□□□ 0.36
Cops6O88545 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Cops6O88545 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
Cops6O88545 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC17.28■□□□□ 0.36
Cops6O88545 Ighv1-51-201ENSMUST00000192903 354 ntBASIC17.28■□□□□ 0.36
Cops6O88545 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Cops6O88545 Gm6266-201ENSMUST00000203844 806 ntBASIC17.28■□□□□ 0.36
Cops6O88545 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cops6O88545 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cops6O88545 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cops6O88545 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cops6O88545 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC17.28■□□□□ 0.36
Cops6O88545 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Cops6O88545 AC121801.1-201ENSMUST00000225363 1899 ntBASIC17.28■□□□□ 0.36
Cops6O88545 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Cops6O88545 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Cops6O88545 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Cops6O88545 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Cops6O88545 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cops6O88545 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cops6O88545 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC17.27■□□□□ 0.36
Cops6O88545 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC17.27■□□□□ 0.36
Cops6O88545 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cops6O88545 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cops6O88545 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC17.27■□□□□ 0.36
Cops6O88545 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Cops6O88545 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cops6O88545 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC17.27■□□□□ 0.36
Cops6O88545 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC17.27■□□□□ 0.36
Cops6O88545 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC17.27■□□□□ 0.36
Cops6O88545 Mir7085-201ENSMUST00000184353 66 ntBASIC17.27■□□□□ 0.36
Cops6O88545 Gm19078-201ENSMUST00000206311 727 ntBASIC17.27■□□□□ 0.36
Cops6O88545 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC17.27■□□□□ 0.36
Cops6O88545 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Cops6O88545 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cops6O88545 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Cops6O88545 Gm9768-201ENSMUST00000206007 2861 ntBASIC17.27■□□□□ 0.36
Cops6O88545 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cops6O88545 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Cops6O88545 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
Cops6O88545 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
Cops6O88545 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Cops6O88545 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Cops6O88545 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC17.27■□□□□ 0.35
Cops6O88545 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Cops6O88545 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
Cops6O88545 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.35
Cops6O88545 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cops6O88545 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cops6O88545 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Cops6O88545 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cops6O88545 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Cops6O88545 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cops6O88545 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cops6O88545 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC17.26■□□□□ 0.35
Cops6O88545 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Cops6O88545 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC17.26■□□□□ 0.35
Cops6O88545 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Cops6O88545 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
Cops6O88545 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Cops6O88545 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC17.26■□□□□ 0.35
Cops6O88545 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC17.26■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms