Protein–RNA interactions for Protein: O88196

Ttc3, E3 ubiquitin-protein ligase TTC3, mousemouse

Known RBP Predictions only

Length 1,979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc3O88196 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Ttc3O88196 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ttc3O88196 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ttc3O88196 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Ttc3O88196 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Ttc3O88196 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Ttc3O88196 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ttc3O88196 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ttc3O88196 Gm37812-201ENSMUST00000195216 2475 ntBASIC14.8□□□□□ -0.04
Ttc3O88196 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ttc3O88196 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ttc3O88196 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Ttc3O88196 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ttc3O88196 Mir692-1-201ENSMUST00000102263 109 ntBASIC14.8□□□□□ -0.04
Ttc3O88196 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ttc3O88196 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC14.8□□□□□ -0.04
Ttc3O88196 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC14.8□□□□□ -0.04
Ttc3O88196 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ttc3O88196 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ttc3O88196 Gm6983-201ENSMUST00000214912 628 ntBASIC14.8□□□□□ -0.04
Ttc3O88196 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC14.8□□□□□ -0.04
Ttc3O88196 CT030657.3-201ENSMUST00000222707 1200 ntBASIC14.8□□□□□ -0.04
Ttc3O88196 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ttc3O88196 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ttc3O88196 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ttc3O88196 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ttc3O88196 AC168058.1-201ENSMUST00000219521 2282 ntBASIC14.79□□□□□ -0.04
Ttc3O88196 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ttc3O88196 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC14.79□□□□□ -0.04
Ttc3O88196 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ttc3O88196 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Ttc3O88196 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ttc3O88196 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ttc3O88196 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Ttc3O88196 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ttc3O88196 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ttc3O88196 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ttc3O88196 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ttc3O88196 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Ttc3O88196 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ttc3O88196 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Ttc3O88196 Gm5035-201ENSMUST00000215581 927 ntBASIC14.79□□□□□ -0.04
Ttc3O88196 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ttc3O88196 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Ttc3O88196 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
Ttc3O88196 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ttc3O88196 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ttc3O88196 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ttc3O88196 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ttc3O88196 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ttc3O88196 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Ttc3O88196 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Ttc3O88196 Gm11960-202ENSMUST00000181063 2858 ntBASIC14.79□□□□□ -0.04
Ttc3O88196 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ttc3O88196 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ttc3O88196 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Ttc3O88196 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ttc3O88196 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC14.78□□□□□ -0.04
Ttc3O88196 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Ttc3O88196 AL645783.1-201ENSMUST00000221416 1832 ntBASIC14.78□□□□□ -0.04
Ttc3O88196 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ttc3O88196 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ttc3O88196 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC14.78□□□□□ -0.04
Ttc3O88196 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC14.78□□□□□ -0.04
Ttc3O88196 Gm29741-201ENSMUST00000192667 421 ntBASIC14.78□□□□□ -0.04
Ttc3O88196 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC14.78□□□□□ -0.04
Ttc3O88196 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC14.78□□□□□ -0.04
Ttc3O88196 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ttc3O88196 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ttc3O88196 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ttc3O88196 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ttc3O88196 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Ttc3O88196 Nupl1-207ENSMUST00000225311 2475 ntBASIC14.78□□□□□ -0.04
Ttc3O88196 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Ttc3O88196 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Ttc3O88196 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Ttc3O88196 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ttc3O88196 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ttc3O88196 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ttc3O88196 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC14.78□□□□□ -0.04
Ttc3O88196 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Ttc3O88196 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Ttc3O88196 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC14.78□□□□□ -0.04
Ttc3O88196 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ttc3O88196 Gm11557-201ENSMUST00000120200 1008 ntBASIC14.78□□□□□ -0.04
Ttc3O88196 Gm15806-201ENSMUST00000120696 955 ntBASIC14.78□□□□□ -0.04
Ttc3O88196 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC14.78□□□□□ -0.04
Ttc3O88196 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC14.78□□□□□ -0.04
Ttc3O88196 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ttc3O88196 Gm8927-201ENSMUST00000181978 981 ntBASIC14.78□□□□□ -0.04
Ttc3O88196 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC14.78□□□□□ -0.04
Ttc3O88196 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC14.78□□□□□ -0.04
Ttc3O88196 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ttc3O88196 Gm3222-201ENSMUST00000071282 990 ntBASIC14.78□□□□□ -0.04
Ttc3O88196 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ttc3O88196 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC14.78□□□□□ -0.04
Ttc3O88196 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ttc3O88196 Mmp14-206ENSMUST00000225641 3238 ntBASIC14.78□□□□□ -0.04
Ttc3O88196 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ttc3O88196 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC14.77□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms