Protein–RNA interactions for Protein: O70591

Pfdn2, Prefoldin subunit 2, mousemouse

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn2O70591 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pfdn2O70591 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pfdn2O70591 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pfdn2O70591 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Pfdn2O70591 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pfdn2O70591 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC11.9□□□□□ -0.5
Pfdn2O70591 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Pfdn2O70591 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pfdn2O70591 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Pfdn2O70591 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Pfdn2O70591 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Pfdn2O70591 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pfdn2O70591 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC11.9□□□□□ -0.5
Pfdn2O70591 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
Pfdn2O70591 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC11.9□□□□□ -0.5
Pfdn2O70591 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Pfdn2O70591 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Pfdn2O70591 Gm7506-201ENSMUST00000207758 815 ntBASIC11.9□□□□□ -0.5
Pfdn2O70591 Gm45609-206ENSMUST00000210176 1023 ntTSL 5 BASIC11.9□□□□□ -0.5
Pfdn2O70591 Rbfox2-207ENSMUST00000227533 1041 ntBASIC11.9□□□□□ -0.5
Pfdn2O70591 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Pfdn2O70591 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC11.9□□□□□ -0.5
Pfdn2O70591 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC11.9□□□□□ -0.5
Pfdn2O70591 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pfdn2O70591 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pfdn2O70591 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pfdn2O70591 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC11.9□□□□□ -0.5
Pfdn2O70591 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pfdn2O70591 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pfdn2O70591 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pfdn2O70591 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Pfdn2O70591 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pfdn2O70591 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Pfdn2O70591 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Pfdn2O70591 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
Pfdn2O70591 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pfdn2O70591 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Pfdn2O70591 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Pfdn2O70591 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Pfdn2O70591 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
Pfdn2O70591 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Pfdn2O70591 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pfdn2O70591 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pfdn2O70591 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pfdn2O70591 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pfdn2O70591 Gm14780-201ENSMUST00000118387 2737 ntBASIC11.89□□□□□ -0.51
Pfdn2O70591 Gm42941-201ENSMUST00000200347 1321 ntBASIC11.89□□□□□ -0.51
Pfdn2O70591 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pfdn2O70591 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pfdn2O70591 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pfdn2O70591 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pfdn2O70591 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Pfdn2O70591 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Pfdn2O70591 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pfdn2O70591 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pfdn2O70591 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pfdn2O70591 Gm8097-201ENSMUST00000117903 829 ntBASIC11.89□□□□□ -0.51
Pfdn2O70591 Gm12895-201ENSMUST00000122214 226 ntBASIC11.89□□□□□ -0.51
Pfdn2O70591 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC11.89□□□□□ -0.51
Pfdn2O70591 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Pfdn2O70591 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC11.89□□□□□ -0.51
Pfdn2O70591 AC093926.2-201ENSMUST00000214468 1228 ntBASIC11.89□□□□□ -0.51
Pfdn2O70591 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pfdn2O70591 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pfdn2O70591 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pfdn2O70591 Vmn2r-ps25-201ENSMUST00000202322 2321 ntBASIC11.89□□□□□ -0.51
Pfdn2O70591 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pfdn2O70591 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pfdn2O70591 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Pfdn2O70591 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pfdn2O70591 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pfdn2O70591 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Pfdn2O70591 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pfdn2O70591 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pfdn2O70591 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pfdn2O70591 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Pfdn2O70591 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC11.89□□□□□ -0.51
Pfdn2O70591 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC11.89□□□□□ -0.51
Pfdn2O70591 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pfdn2O70591 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pfdn2O70591 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Pfdn2O70591 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pfdn2O70591 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pfdn2O70591 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC11.88□□□□□ -0.51
Pfdn2O70591 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pfdn2O70591 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pfdn2O70591 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pfdn2O70591 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pfdn2O70591 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Pfdn2O70591 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Pfdn2O70591 Gm44645-201ENSMUST00000205492 1653 ntBASIC11.88□□□□□ -0.51
Pfdn2O70591 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pfdn2O70591 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Pfdn2O70591 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Pfdn2O70591 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pfdn2O70591 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pfdn2O70591 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC11.88□□□□□ -0.51
Pfdn2O70591 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC11.88□□□□□ -0.51
Pfdn2O70591 Lvrn-201ENSMUST00000025358 3219 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Pfdn2O70591 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 59.1 ms