Protein–RNA interactions for Protein: O35449

Prrt1, Proline-rich transmembrane protein 1, mousemouse

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prrt1O35449 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Prrt1O35449 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Prrt1O35449 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Prrt1O35449 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Prrt1O35449 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Prrt1O35449 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Prrt1O35449 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Prrt1O35449 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Prrt1O35449 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Prrt1O35449 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Prrt1O35449 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Prrt1O35449 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Prrt1O35449 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Prrt1O35449 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Prrt1O35449 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Prrt1O35449 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Prrt1O35449 Grk6-205ENSMUST00000224653 2976 ntBASIC12.01□□□□□ -0.49
Prrt1O35449 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Prrt1O35449 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Prrt1O35449 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Prrt1O35449 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC12.01□□□□□ -0.49
Prrt1O35449 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Prrt1O35449 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC12.01□□□□□ -0.49
Prrt1O35449 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Prrt1O35449 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC12.01□□□□□ -0.49
Prrt1O35449 Gm37153-201ENSMUST00000193637 231 ntBASIC12.01□□□□□ -0.49
Prrt1O35449 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Prrt1O35449 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Prrt1O35449 AC154595.3-201ENSMUST00000224579 384 ntBASIC12.01□□□□□ -0.49
Prrt1O35449 Rbfox2-207ENSMUST00000227533 1041 ntBASIC12.01□□□□□ -0.49
Prrt1O35449 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Prrt1O35449 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Prrt1O35449 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Prrt1O35449 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Prrt1O35449 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Prrt1O35449 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Prrt1O35449 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Prrt1O35449 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Prrt1O35449 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Prrt1O35449 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Prrt1O35449 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC12.01□□□□□ -0.49
Prrt1O35449 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Prrt1O35449 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Prrt1O35449 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Prrt1O35449 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Prrt1O35449 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC12.01□□□□□ -0.49
Prrt1O35449 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Prrt1O35449 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Prrt1O35449 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Prrt1O35449 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Prrt1O35449 AC154262.2-201ENSMUST00000224310 2293 ntBASIC12□□□□□ -0.49
Prrt1O35449 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
Prrt1O35449 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Prrt1O35449 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
Prrt1O35449 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Prrt1O35449 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Prrt1O35449 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC12□□□□□ -0.49
Prrt1O35449 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC12□□□□□ -0.49
Prrt1O35449 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC12□□□□□ -0.49
Prrt1O35449 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Prrt1O35449 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Prrt1O35449 Gm37133-201ENSMUST00000192705 1922 ntBASIC12□□□□□ -0.49
Prrt1O35449 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Prrt1O35449 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC12□□□□□ -0.49
Prrt1O35449 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC12□□□□□ -0.49
Prrt1O35449 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC12□□□□□ -0.49
Prrt1O35449 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
Prrt1O35449 Gm4691-201ENSMUST00000182339 1000 ntBASIC12□□□□□ -0.49
Prrt1O35449 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Prrt1O35449 Gm2451-201ENSMUST00000199447 999 ntBASIC12□□□□□ -0.49
Prrt1O35449 Gm10290-201ENSMUST00000200451 999 ntBASIC12□□□□□ -0.49
Prrt1O35449 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC12□□□□□ -0.49
Prrt1O35449 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC12□□□□□ -0.49
Prrt1O35449 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC12□□□□□ -0.49
Prrt1O35449 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Prrt1O35449 Gm7787-201ENSMUST00000216858 688 ntBASIC12□□□□□ -0.49
Prrt1O35449 Gm9182-201ENSMUST00000217829 639 ntBASIC12□□□□□ -0.49
Prrt1O35449 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Prrt1O35449 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Prrt1O35449 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC12□□□□□ -0.49
Prrt1O35449 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Prrt1O35449 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Prrt1O35449 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC12□□□□□ -0.49
Prrt1O35449 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Prrt1O35449 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Prrt1O35449 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Prrt1O35449 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Prrt1O35449 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Prrt1O35449 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC12□□□□□ -0.49
Prrt1O35449 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Prrt1O35449 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Prrt1O35449 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Prrt1O35449 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Prrt1O35449 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC12□□□□□ -0.49
Prrt1O35449 AC131743.5-201ENSMUST00000220775 1618 ntBASIC12□□□□□ -0.49
Prrt1O35449 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Prrt1O35449 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC12□□□□□ -0.49
Prrt1O35449 AC155298.2-201ENSMUST00000225485 6226 ntBASIC12□□□□□ -0.49
Prrt1O35449 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Prrt1O35449 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC12□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms