Protein–RNA interactions for Protein: O35393

Efnb3, Ephrin-B3, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Efnb3O35393 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Efnb3O35393 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Efnb3O35393 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Efnb3O35393 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Efnb3O35393 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Efnb3O35393 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Efnb3O35393 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Efnb3O35393 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Efnb3O35393 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Efnb3O35393 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Efnb3O35393 Gm6944-201ENSMUST00000182449 1006 ntBASIC11.25□□□□□ -0.61
Efnb3O35393 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC11.25□□□□□ -0.61
Efnb3O35393 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Efnb3O35393 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Efnb3O35393 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Efnb3O35393 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Efnb3O35393 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Efnb3O35393 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Efnb3O35393 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Efnb3O35393 Gm43364-201ENSMUST00000196046 3274 ntBASIC11.25□□□□□ -0.61
Efnb3O35393 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Efnb3O35393 AC121801.1-201ENSMUST00000225363 1899 ntBASIC11.25□□□□□ -0.61
Efnb3O35393 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Efnb3O35393 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Efnb3O35393 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC11.25□□□□□ -0.61
Efnb3O35393 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Efnb3O35393 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Efnb3O35393 Il17rd-203ENSMUST00000225146 3366 ntBASIC11.25□□□□□ -0.61
Efnb3O35393 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Efnb3O35393 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Efnb3O35393 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Efnb3O35393 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Efnb3O35393 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Efnb3O35393 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Efnb3O35393 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Efnb3O35393 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Efnb3O35393 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Efnb3O35393 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Efnb3O35393 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Efnb3O35393 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Efnb3O35393 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Efnb3O35393 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Efnb3O35393 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Efnb3O35393 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Efnb3O35393 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Efnb3O35393 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Efnb3O35393 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Efnb3O35393 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Efnb3O35393 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Efnb3O35393 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC11.24□□□□□ -0.61
Efnb3O35393 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Efnb3O35393 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC11.24□□□□□ -0.61
Efnb3O35393 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC11.24□□□□□ -0.61
Efnb3O35393 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Efnb3O35393 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC11.24□□□□□ -0.61
Efnb3O35393 Gm6550-201ENSMUST00000187574 993 ntBASIC11.24□□□□□ -0.61
Efnb3O35393 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC11.24□□□□□ -0.61
Efnb3O35393 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC11.24□□□□□ -0.61
Efnb3O35393 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Efnb3O35393 AV026068-213ENSMUST00000223675 1171 ntBASIC11.24□□□□□ -0.61
Efnb3O35393 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Efnb3O35393 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Efnb3O35393 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC11.24□□□□□ -0.61
Efnb3O35393 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Efnb3O35393 AC119177.1-201ENSMUST00000227647 1332 ntBASIC11.24□□□□□ -0.61
Efnb3O35393 Gm42928-201ENSMUST00000197338 3339 ntBASIC11.24□□□□□ -0.61
Efnb3O35393 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC11.24□□□□□ -0.61
Efnb3O35393 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Efnb3O35393 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Efnb3O35393 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Efnb3O35393 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Efnb3O35393 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Efnb3O35393 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Efnb3O35393 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Efnb3O35393 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Efnb3O35393 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Efnb3O35393 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Efnb3O35393 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Efnb3O35393 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Efnb3O35393 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Efnb3O35393 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Efnb3O35393 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Efnb3O35393 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Efnb3O35393 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Efnb3O35393 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC11.23□□□□□ -0.61
Efnb3O35393 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Efnb3O35393 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Efnb3O35393 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Efnb3O35393 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Efnb3O35393 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Efnb3O35393 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Efnb3O35393 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Efnb3O35393 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Efnb3O35393 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Efnb3O35393 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC11.23□□□□□ -0.61
Efnb3O35393 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Efnb3O35393 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Efnb3O35393 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Efnb3O35393 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Efnb3O35393 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms