Protein–RNA interactions for Protein: O35137

Alx4, Homeobox protein aristaless-like 4, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx4O35137 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Alx4O35137 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Alx4O35137 Gm10729-202ENSMUST00000193403 1375 ntBASIC12.69□□□□□ -0.38
Alx4O35137 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Alx4O35137 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Alx4O35137 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Alx4O35137 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Alx4O35137 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Alx4O35137 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Alx4O35137 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Alx4O35137 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Alx4O35137 AC115735.4-201ENSMUST00000227460 1944 ntBASIC12.69□□□□□ -0.38
Alx4O35137 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Alx4O35137 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Alx4O35137 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Alx4O35137 Gm12882-201ENSMUST00000121696 517 ntBASIC12.69□□□□□ -0.38
Alx4O35137 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC12.69□□□□□ -0.38
Alx4O35137 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC12.69□□□□□ -0.38
Alx4O35137 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC12.69□□□□□ -0.38
Alx4O35137 Umpk-ps-201ENSMUST00000211897 827 ntBASIC12.69□□□□□ -0.38
Alx4O35137 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC12.69□□□□□ -0.38
Alx4O35137 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC12.69□□□□□ -0.38
Alx4O35137 Thap2-203ENSMUST00000218989 527 ntBASIC12.69□□□□□ -0.38
Alx4O35137 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC12.69□□□□□ -0.38
Alx4O35137 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Alx4O35137 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Alx4O35137 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Alx4O35137 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Alx4O35137 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Alx4O35137 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Alx4O35137 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Alx4O35137 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Alx4O35137 Gm12020-201ENSMUST00000119030 2042 ntBASIC12.69□□□□□ -0.38
Alx4O35137 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Alx4O35137 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Alx4O35137 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Alx4O35137 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Alx4O35137 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Alx4O35137 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Alx4O35137 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Alx4O35137 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Alx4O35137 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Alx4O35137 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC12.68□□□□□ -0.38
Alx4O35137 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Alx4O35137 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC12.68□□□□□ -0.38
Alx4O35137 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Alx4O35137 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Alx4O35137 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Alx4O35137 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Alx4O35137 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Alx4O35137 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Alx4O35137 Gm14371-201ENSMUST00000138925 1518 ntBASIC12.68□□□□□ -0.38
Alx4O35137 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Alx4O35137 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Alx4O35137 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Alx4O35137 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Alx4O35137 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Alx4O35137 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC12.68□□□□□ -0.38
Alx4O35137 Gm24589-201ENSMUST00000116692 94 ntBASIC12.68□□□□□ -0.38
Alx4O35137 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Alx4O35137 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC12.68□□□□□ -0.38
Alx4O35137 Mir7036b-201ENSMUST00000184791 63 ntBASIC12.68□□□□□ -0.38
Alx4O35137 Gm27628-201ENSMUST00000184911 107 ntBASIC12.68□□□□□ -0.38
Alx4O35137 AC161829.1-201ENSMUST00000220298 281 ntBASIC12.68□□□□□ -0.38
Alx4O35137 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Alx4O35137 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Alx4O35137 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Alx4O35137 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Alx4O35137 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Alx4O35137 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Alx4O35137 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Alx4O35137 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Alx4O35137 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Alx4O35137 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
Alx4O35137 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Alx4O35137 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Alx4O35137 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Alx4O35137 Gm37133-201ENSMUST00000192705 1922 ntBASIC12.68□□□□□ -0.38
Alx4O35137 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Alx4O35137 AC139054.1-201ENSMUST00000226898 1598 ntBASIC12.68□□□□□ -0.38
Alx4O35137 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Alx4O35137 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Alx4O35137 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Alx4O35137 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Alx4O35137 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Alx4O35137 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Alx4O35137 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Alx4O35137 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Alx4O35137 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Alx4O35137 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC12.67□□□□□ -0.38
Alx4O35137 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC12.67□□□□□ -0.38
Alx4O35137 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Alx4O35137 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Alx4O35137 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC12.67□□□□□ -0.38
Alx4O35137 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Alx4O35137 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Alx4O35137 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC12.67□□□□□ -0.38
Alx4O35137 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Alx4O35137 Gm27301-201ENSMUST00000184012 127 ntBASIC12.67□□□□□ -0.38
Alx4O35137 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 48.2 ms