Protein–RNA interactions for Protein: J3QNT6

Gm5039, Predicted gene 5039, mousemouse

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5039J3QNT6 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Gm5039J3QNT6 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Gm5039J3QNT6 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Gm5039J3QNT6 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Gm5039J3QNT6 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Gm5039J3QNT6 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Gm5039J3QNT6 Syt7-204ENSMUST00000223586 1344 ntBASIC12.91□□□□□ -0.34
Gm5039J3QNT6 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC12.91□□□□□ -0.34
Gm5039J3QNT6 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC12.91□□□□□ -0.34
Gm5039J3QNT6 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Gm5039J3QNT6 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Gm5039J3QNT6 Syt7-205ENSMUST00000224135 1557 ntBASIC12.91□□□□□ -0.34
Gm5039J3QNT6 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Gm5039J3QNT6 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC12.91□□□□□ -0.34
Gm5039J3QNT6 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Gm5039J3QNT6 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Gm5039J3QNT6 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Gm5039J3QNT6 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Gm5039J3QNT6 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Gm5039J3QNT6 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Gm5039J3QNT6 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Gm5039J3QNT6 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Gm5039J3QNT6 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Gm5039J3QNT6 Gm43703-201ENSMUST00000200523 763 ntBASIC12.91□□□□□ -0.34
Gm5039J3QNT6 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Gm5039J3QNT6 Gm6916-202ENSMUST00000205523 195 ntBASIC12.91□□□□□ -0.34
Gm5039J3QNT6 Gm7730-201ENSMUST00000212486 454 ntBASIC12.91□□□□□ -0.34
Gm5039J3QNT6 AC124732.1-201ENSMUST00000221551 910 ntBASIC12.91□□□□□ -0.34
Gm5039J3QNT6 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Gm5039J3QNT6 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Gm5039J3QNT6 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Gm5039J3QNT6 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Gm5039J3QNT6 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Gm5039J3QNT6 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC12.91□□□□□ -0.34
Gm5039J3QNT6 Gm5763-201ENSMUST00000155951 1530 ntBASIC12.91□□□□□ -0.34
Gm5039J3QNT6 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Gm5039J3QNT6 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Gm5039J3QNT6 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Gm5039J3QNT6 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Gm5039J3QNT6 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Gm5039J3QNT6 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Gm5039J3QNT6 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Gm5039J3QNT6 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Gm5039J3QNT6 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Gm5039J3QNT6 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Gm5039J3QNT6 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC12.91□□□□□ -0.34
Gm5039J3QNT6 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Gm5039J3QNT6 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Gm5039J3QNT6 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC12.9□□□□□ -0.34
Gm5039J3QNT6 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Gm5039J3QNT6 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Gm5039J3QNT6 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Gm5039J3QNT6 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Gm5039J3QNT6 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Gm5039J3QNT6 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Gm5039J3QNT6 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Gm5039J3QNT6 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Gm5039J3QNT6 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Gm5039J3QNT6 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
Gm5039J3QNT6 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Gm5039J3QNT6 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Gm5039J3QNT6 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Gm5039J3QNT6 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Gm5039J3QNT6 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC12.9□□□□□ -0.34
Gm5039J3QNT6 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Gm5039J3QNT6 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Gm5039J3QNT6 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Gm5039J3QNT6 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC12.9□□□□□ -0.34
Gm5039J3QNT6 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Gm5039J3QNT6 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Gm5039J3QNT6 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC12.9□□□□□ -0.34
Gm5039J3QNT6 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Gm5039J3QNT6 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Gm5039J3QNT6 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Gm5039J3QNT6 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Gm5039J3QNT6 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC12.9□□□□□ -0.34
Gm5039J3QNT6 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Gm5039J3QNT6 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Gm5039J3QNT6 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.35
Gm5039J3QNT6 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC12.9□□□□□ -0.35
Gm5039J3QNT6 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Gm5039J3QNT6 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
Gm5039J3QNT6 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
Gm5039J3QNT6 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Gm5039J3QNT6 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Gm5039J3QNT6 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Gm5039J3QNT6 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC12.89□□□□□ -0.35
Gm5039J3QNT6 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Gm5039J3QNT6 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Gm5039J3QNT6 BC001981-202ENSMUST00000191393 1545 ntBASIC12.89□□□□□ -0.35
Gm5039J3QNT6 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Gm5039J3QNT6 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Gm5039J3QNT6 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Gm5039J3QNT6 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Gm5039J3QNT6 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Gm5039J3QNT6 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Gm5039J3QNT6 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Gm5039J3QNT6 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Gm5039J3QNT6 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Gm5039J3QNT6 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms