Protein–RNA interactions for Protein: G3X8Y1

Trim55, MCG19772, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim55G3X8Y1 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trim55G3X8Y1 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trim55G3X8Y1 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC14.62□□□□□ -0.07
Trim55G3X8Y1 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC14.62□□□□□ -0.07
Trim55G3X8Y1 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Trim55G3X8Y1 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trim55G3X8Y1 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Trim55G3X8Y1 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC14.62□□□□□ -0.07
Trim55G3X8Y1 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trim55G3X8Y1 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trim55G3X8Y1 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trim55G3X8Y1 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trim55G3X8Y1 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trim55G3X8Y1 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trim55G3X8Y1 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trim55G3X8Y1 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trim55G3X8Y1 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trim55G3X8Y1 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trim55G3X8Y1 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC14.61□□□□□ -0.07
Trim55G3X8Y1 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trim55G3X8Y1 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trim55G3X8Y1 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trim55G3X8Y1 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC14.61□□□□□ -0.07
Trim55G3X8Y1 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trim55G3X8Y1 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trim55G3X8Y1 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Trim55G3X8Y1 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Trim55G3X8Y1 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
Trim55G3X8Y1 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC14.61□□□□□ -0.07
Trim55G3X8Y1 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC14.61□□□□□ -0.07
Trim55G3X8Y1 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC14.61□□□□□ -0.07
Trim55G3X8Y1 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC14.61□□□□□ -0.07
Trim55G3X8Y1 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trim55G3X8Y1 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trim55G3X8Y1 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC14.61□□□□□ -0.07
Trim55G3X8Y1 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC14.61□□□□□ -0.07
Trim55G3X8Y1 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trim55G3X8Y1 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trim55G3X8Y1 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trim55G3X8Y1 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trim55G3X8Y1 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trim55G3X8Y1 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trim55G3X8Y1 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trim55G3X8Y1 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trim55G3X8Y1 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trim55G3X8Y1 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trim55G3X8Y1 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trim55G3X8Y1 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trim55G3X8Y1 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trim55G3X8Y1 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trim55G3X8Y1 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trim55G3X8Y1 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trim55G3X8Y1 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trim55G3X8Y1 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trim55G3X8Y1 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trim55G3X8Y1 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trim55G3X8Y1 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trim55G3X8Y1 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trim55G3X8Y1 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trim55G3X8Y1 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trim55G3X8Y1 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC14.6□□□□□ -0.07
Trim55G3X8Y1 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trim55G3X8Y1 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trim55G3X8Y1 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
Trim55G3X8Y1 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
Trim55G3X8Y1 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Trim55G3X8Y1 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Trim55G3X8Y1 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Trim55G3X8Y1 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Trim55G3X8Y1 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Trim55G3X8Y1 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trim55G3X8Y1 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trim55G3X8Y1 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC14.6□□□□□ -0.07
Trim55G3X8Y1 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trim55G3X8Y1 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Trim55G3X8Y1 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trim55G3X8Y1 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Trim55G3X8Y1 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Trim55G3X8Y1 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trim55G3X8Y1 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trim55G3X8Y1 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Trim55G3X8Y1 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trim55G3X8Y1 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trim55G3X8Y1 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Trim55G3X8Y1 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Trim55G3X8Y1 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trim55G3X8Y1 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC14.6□□□□□ -0.07
Trim55G3X8Y1 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC14.6□□□□□ -0.07
Trim55G3X8Y1 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trim55G3X8Y1 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trim55G3X8Y1 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trim55G3X8Y1 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trim55G3X8Y1 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC14.59□□□□□ -0.07
Trim55G3X8Y1 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trim55G3X8Y1 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trim55G3X8Y1 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trim55G3X8Y1 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trim55G3X8Y1 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC14.59□□□□□ -0.07
Trim55G3X8Y1 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trim55G3X8Y1 Gm25016-201ENSMUST00000158399 131 ntBASIC14.59□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms