Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Gm42442-201ENSMUST00000197951 1133 ntBASIC17.06■□□□□ 0.32
NpcdF8VQB8 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC17.06■□□□□ 0.32
NpcdF8VQB8 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NpcdF8VQB8 CU024892.2-201ENSMUST00000224608 832 ntBASIC17.06■□□□□ 0.32
NpcdF8VQB8 Gm10012-201ENSMUST00000078252 192 ntBASIC17.06■□□□□ 0.32
NpcdF8VQB8 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
NpcdF8VQB8 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
NpcdF8VQB8 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NpcdF8VQB8 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
NpcdF8VQB8 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NpcdF8VQB8 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
NpcdF8VQB8 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NpcdF8VQB8 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NpcdF8VQB8 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NpcdF8VQB8 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
NpcdF8VQB8 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NpcdF8VQB8 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NpcdF8VQB8 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
NpcdF8VQB8 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
NpcdF8VQB8 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NpcdF8VQB8 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC17.05■□□□□ 0.32
NpcdF8VQB8 Gm8242-201ENSMUST00000193029 1420 ntBASIC17.05■□□□□ 0.32
NpcdF8VQB8 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NpcdF8VQB8 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NpcdF8VQB8 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NpcdF8VQB8 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
NpcdF8VQB8 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NpcdF8VQB8 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NpcdF8VQB8 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NpcdF8VQB8 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NpcdF8VQB8 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
NpcdF8VQB8 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NpcdF8VQB8 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
NpcdF8VQB8 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
NpcdF8VQB8 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC17.05■□□□□ 0.32
NpcdF8VQB8 Gm4857-201ENSMUST00000192718 785 ntBASIC17.05■□□□□ 0.32
NpcdF8VQB8 Gm18056-201ENSMUST00000207670 568 ntBASIC17.05■□□□□ 0.32
NpcdF8VQB8 Gm18061-201ENSMUST00000208350 562 ntBASIC17.05■□□□□ 0.32
NpcdF8VQB8 Gm18063-201ENSMUST00000208529 568 ntBASIC17.05■□□□□ 0.32
NpcdF8VQB8 Gm18052-201ENSMUST00000208750 559 ntBASIC17.05■□□□□ 0.32
NpcdF8VQB8 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NpcdF8VQB8 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NpcdF8VQB8 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
NpcdF8VQB8 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
NpcdF8VQB8 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
NpcdF8VQB8 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NpcdF8VQB8 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
NpcdF8VQB8 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NpcdF8VQB8 Dctn4-202ENSMUST00000223590 1530 ntBASIC17.05■□□□□ 0.32
NpcdF8VQB8 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NpcdF8VQB8 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
NpcdF8VQB8 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
NpcdF8VQB8 Gm42690-201ENSMUST00000197921 1836 ntBASIC17.05■□□□□ 0.32
NpcdF8VQB8 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NpcdF8VQB8 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
NpcdF8VQB8 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NpcdF8VQB8 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
NpcdF8VQB8 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
NpcdF8VQB8 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
NpcdF8VQB8 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NpcdF8VQB8 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NpcdF8VQB8 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
NpcdF8VQB8 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC17.04■□□□□ 0.32
NpcdF8VQB8 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NpcdF8VQB8 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC17.04■□□□□ 0.32
NpcdF8VQB8 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
NpcdF8VQB8 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
NpcdF8VQB8 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NpcdF8VQB8 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NpcdF8VQB8 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
NpcdF8VQB8 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
NpcdF8VQB8 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NpcdF8VQB8 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC17.04■□□□□ 0.32
NpcdF8VQB8 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC17.04■□□□□ 0.32
NpcdF8VQB8 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NpcdF8VQB8 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
NpcdF8VQB8 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
NpcdF8VQB8 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC17.04■□□□□ 0.32
NpcdF8VQB8 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
NpcdF8VQB8 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NpcdF8VQB8 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NpcdF8VQB8 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
NpcdF8VQB8 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
NpcdF8VQB8 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NpcdF8VQB8 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NpcdF8VQB8 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC17.03■□□□□ 0.32
NpcdF8VQB8 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NpcdF8VQB8 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC17.03■□□□□ 0.32
NpcdF8VQB8 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NpcdF8VQB8 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
NpcdF8VQB8 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
NpcdF8VQB8 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NpcdF8VQB8 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NpcdF8VQB8 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
NpcdF8VQB8 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NpcdF8VQB8 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NpcdF8VQB8 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
NpcdF8VQB8 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
NpcdF8VQB8 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
NpcdF8VQB8 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms