Protein–RNA interactions for Protein: F6ZDS4

Tpr, Nucleoprotein TPR, mousemouse

Known RBP Predictions only

Length 2,431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TprF6ZDS4 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
TprF6ZDS4 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TprF6ZDS4 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TprF6ZDS4 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
TprF6ZDS4 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TprF6ZDS4 Gm5049-201ENSMUST00000195878 1590 ntBASIC13.06□□□□□ -0.32
TprF6ZDS4 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TprF6ZDS4 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
TprF6ZDS4 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TprF6ZDS4 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC13.06□□□□□ -0.32
TprF6ZDS4 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
TprF6ZDS4 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC13.06□□□□□ -0.32
TprF6ZDS4 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
TprF6ZDS4 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
TprF6ZDS4 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TprF6ZDS4 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
TprF6ZDS4 Gm5187-201ENSMUST00000117317 991 ntBASIC13.06□□□□□ -0.32
TprF6ZDS4 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
TprF6ZDS4 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
TprF6ZDS4 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
TprF6ZDS4 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
TprF6ZDS4 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TprF6ZDS4 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TprF6ZDS4 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC13.06□□□□□ -0.32
TprF6ZDS4 Gm43289-201ENSMUST00000200537 1475 ntBASIC13.06□□□□□ -0.32
TprF6ZDS4 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC13.06□□□□□ -0.32
TprF6ZDS4 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
TprF6ZDS4 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC13.06□□□□□ -0.32
TprF6ZDS4 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
TprF6ZDS4 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TprF6ZDS4 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC13.05□□□□□ -0.32
TprF6ZDS4 D8Ertd738e-201ENSMUST00000019506 616 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
TprF6ZDS4 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TprF6ZDS4 Gm29787-201ENSMUST00000222129 849 ntBASIC13.05□□□□□ -0.32
TprF6ZDS4 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
TprF6ZDS4 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
TprF6ZDS4 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
TprF6ZDS4 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TprF6ZDS4 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TprF6ZDS4 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
TprF6ZDS4 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
TprF6ZDS4 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
TprF6ZDS4 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
TprF6ZDS4 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
TprF6ZDS4 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC13.05□□□□□ -0.32
TprF6ZDS4 AC150560.1-201ENSMUST00000227731 1187 ntBASIC13.05□□□□□ -0.32
TprF6ZDS4 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TprF6ZDS4 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TprF6ZDS4 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TprF6ZDS4 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
TprF6ZDS4 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
TprF6ZDS4 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TprF6ZDS4 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TprF6ZDS4 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
TprF6ZDS4 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
TprF6ZDS4 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TprF6ZDS4 Gm42690-201ENSMUST00000197921 1836 ntBASIC13.05□□□□□ -0.32
TprF6ZDS4 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
TprF6ZDS4 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TprF6ZDS4 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC13.05□□□□□ -0.32
TprF6ZDS4 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
TprF6ZDS4 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
TprF6ZDS4 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TprF6ZDS4 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
TprF6ZDS4 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC13.04□□□□□ -0.32
TprF6ZDS4 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC13.04□□□□□ -0.32
TprF6ZDS4 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
TprF6ZDS4 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
TprF6ZDS4 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC13.04□□□□□ -0.32
TprF6ZDS4 Gm6244-201ENSMUST00000178732 841 ntBASIC13.04□□□□□ -0.32
TprF6ZDS4 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
TprF6ZDS4 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC13.04□□□□□ -0.32
TprF6ZDS4 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TprF6ZDS4 Gm10313-201ENSMUST00000095320 1002 ntBASIC13.04□□□□□ -0.32
TprF6ZDS4 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC13.04□□□□□ -0.32
TprF6ZDS4 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TprF6ZDS4 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
TprF6ZDS4 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
TprF6ZDS4 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TprF6ZDS4 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TprF6ZDS4 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
TprF6ZDS4 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
TprF6ZDS4 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TprF6ZDS4 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TprF6ZDS4 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TprF6ZDS4 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
TprF6ZDS4 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TprF6ZDS4 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TprF6ZDS4 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TprF6ZDS4 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TprF6ZDS4 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
TprF6ZDS4 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
TprF6ZDS4 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC13.04□□□□□ -0.32
TprF6ZDS4 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TprF6ZDS4 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TprF6ZDS4 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC13.04□□□□□ -0.32
TprF6ZDS4 Gm10766-202ENSMUST00000194123 606 ntBASIC13.04□□□□□ -0.32
TprF6ZDS4 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TprF6ZDS4 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TprF6ZDS4 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms