Protein–RNA interactions for Protein: E9PXF0

Pcdh17, Protocadherin 17, mousemouse

Predictions only

Length 1,157 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh17E9PXF0 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdh17E9PXF0 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdh17E9PXF0 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdh17E9PXF0 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Pcdh17E9PXF0 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdh17E9PXF0 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC13.25□□□□□ -0.29
Pcdh17E9PXF0 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdh17E9PXF0 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdh17E9PXF0 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdh17E9PXF0 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC13.25□□□□□ -0.29
Pcdh17E9PXF0 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdh17E9PXF0 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdh17E9PXF0 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdh17E9PXF0 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdh17E9PXF0 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdh17E9PXF0 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
Pcdh17E9PXF0 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdh17E9PXF0 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdh17E9PXF0 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC13.25□□□□□ -0.29
Pcdh17E9PXF0 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC13.25□□□□□ -0.29
Pcdh17E9PXF0 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC13.25□□□□□ -0.29
Pcdh17E9PXF0 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Pcdh17E9PXF0 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC13.25□□□□□ -0.29
Pcdh17E9PXF0 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdh17E9PXF0 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdh17E9PXF0 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Pcdh17E9PXF0 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Pcdh17E9PXF0 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdh17E9PXF0 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdh17E9PXF0 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdh17E9PXF0 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdh17E9PXF0 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Pcdh17E9PXF0 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdh17E9PXF0 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdh17E9PXF0 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdh17E9PXF0 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdh17E9PXF0 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdh17E9PXF0 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdh17E9PXF0 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdh17E9PXF0 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC13.24□□□□□ -0.29
Pcdh17E9PXF0 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdh17E9PXF0 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC13.24□□□□□ -0.29
Pcdh17E9PXF0 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC13.24□□□□□ -0.29
Pcdh17E9PXF0 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdh17E9PXF0 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdh17E9PXF0 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdh17E9PXF0 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdh17E9PXF0 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdh17E9PXF0 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdh17E9PXF0 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Pcdh17E9PXF0 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdh17E9PXF0 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdh17E9PXF0 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdh17E9PXF0 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Pcdh17E9PXF0 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdh17E9PXF0 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdh17E9PXF0 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdh17E9PXF0 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdh17E9PXF0 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdh17E9PXF0 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Pcdh17E9PXF0 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdh17E9PXF0 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdh17E9PXF0 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC13.23□□□□□ -0.29
Pcdh17E9PXF0 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdh17E9PXF0 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdh17E9PXF0 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdh17E9PXF0 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdh17E9PXF0 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdh17E9PXF0 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Pcdh17E9PXF0 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdh17E9PXF0 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdh17E9PXF0 Gm9229-201ENSMUST00000222777 126 ntBASIC13.23□□□□□ -0.29
Pcdh17E9PXF0 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdh17E9PXF0 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Pcdh17E9PXF0 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdh17E9PXF0 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdh17E9PXF0 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Pcdh17E9PXF0 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC13.23□□□□□ -0.29
Pcdh17E9PXF0 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdh17E9PXF0 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC13.23□□□□□ -0.29
Pcdh17E9PXF0 Gm37297-201ENSMUST00000192974 2384 ntBASIC13.23□□□□□ -0.29
Pcdh17E9PXF0 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Pcdh17E9PXF0 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdh17E9PXF0 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdh17E9PXF0 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdh17E9PXF0 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdh17E9PXF0 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdh17E9PXF0 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdh17E9PXF0 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdh17E9PXF0 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdh17E9PXF0 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdh17E9PXF0 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC13.23□□□□□ -0.29
Pcdh17E9PXF0 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdh17E9PXF0 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdh17E9PXF0 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Pcdh17E9PXF0 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdh17E9PXF0 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdh17E9PXF0 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdh17E9PXF0 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdh17E9PXF0 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 58.9 ms