Protein–RNA interactions for Protein: D3Z6J4

Vpreb3, Pre-B lymphocyte gene 3, mousemouse

Predictions only

Length 130 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vpreb3D3Z6J4 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC8.98□□□□□ -0.97
Vpreb3D3Z6J4 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Vpreb3D3Z6J4 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Vpreb3D3Z6J4 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC8.98□□□□□ -0.97
Vpreb3D3Z6J4 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Vpreb3D3Z6J4 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Vpreb3D3Z6J4 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Vpreb3D3Z6J4 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Vpreb3D3Z6J4 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Vpreb3D3Z6J4 Gm26513-201ENSMUST00000181802 2489 ntBASIC8.98□□□□□ -0.97
Vpreb3D3Z6J4 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC8.98□□□□□ -0.97
Vpreb3D3Z6J4 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC8.98□□□□□ -0.97
Vpreb3D3Z6J4 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Vpreb3D3Z6J4 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC8.98□□□□□ -0.97
Vpreb3D3Z6J4 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC8.98□□□□□ -0.97
Vpreb3D3Z6J4 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC8.98□□□□□ -0.97
Vpreb3D3Z6J4 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Vpreb3D3Z6J4 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Vpreb3D3Z6J4 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC8.98□□□□□ -0.97
Vpreb3D3Z6J4 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC8.98□□□□□ -0.97
Vpreb3D3Z6J4 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC8.98□□□□□ -0.97
Vpreb3D3Z6J4 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Vpreb3D3Z6J4 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC8.98□□□□□ -0.97
Vpreb3D3Z6J4 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Vpreb3D3Z6J4 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Vpreb3D3Z6J4 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC8.97□□□□□ -0.97
Vpreb3D3Z6J4 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Vpreb3D3Z6J4 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC8.97□□□□□ -0.97
Vpreb3D3Z6J4 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC8.97□□□□□ -0.97
Vpreb3D3Z6J4 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC8.97□□□□□ -0.97
Vpreb3D3Z6J4 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC8.97□□□□□ -0.97
Vpreb3D3Z6J4 Myo7a-204ENSMUST00000107128 7506 ntAPPRIS ALT2 TSL 5 BASIC8.97□□□□□ -0.97
Vpreb3D3Z6J4 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC8.97□□□□□ -0.97
Vpreb3D3Z6J4 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC8.97□□□□□ -0.97
Vpreb3D3Z6J4 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Vpreb3D3Z6J4 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Vpreb3D3Z6J4 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Vpreb3D3Z6J4 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC8.97□□□□□ -0.97
Vpreb3D3Z6J4 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC8.97□□□□□ -0.97
Vpreb3D3Z6J4 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC8.97□□□□□ -0.97
Vpreb3D3Z6J4 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Vpreb3D3Z6J4 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Vpreb3D3Z6J4 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC8.97□□□□□ -0.97
Vpreb3D3Z6J4 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Vpreb3D3Z6J4 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC8.97□□□□□ -0.97
Vpreb3D3Z6J4 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC8.97□□□□□ -0.97
Vpreb3D3Z6J4 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Vpreb3D3Z6J4 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC8.97□□□□□ -0.97
Vpreb3D3Z6J4 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC8.97□□□□□ -0.97
Vpreb3D3Z6J4 Gm15593-201ENSMUST00000122085 1008 ntBASIC8.97□□□□□ -0.97
Vpreb3D3Z6J4 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC8.97□□□□□ -0.97
Vpreb3D3Z6J4 Gm7284-201ENSMUST00000131667 944 ntBASIC8.97□□□□□ -0.97
Vpreb3D3Z6J4 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Vpreb3D3Z6J4 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC8.97□□□□□ -0.97
Vpreb3D3Z6J4 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Vpreb3D3Z6J4 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC8.97□□□□□ -0.97
Vpreb3D3Z6J4 Gm27357-201ENSMUST00000183754 135 ntBASIC8.97□□□□□ -0.97
Vpreb3D3Z6J4 Gm13830-205ENSMUST00000201195 1155 ntBASIC8.97□□□□□ -0.97
Vpreb3D3Z6J4 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC8.97□□□□□ -0.97
Vpreb3D3Z6J4 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC8.97□□□□□ -0.97
Vpreb3D3Z6J4 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC8.97□□□□□ -0.97
Vpreb3D3Z6J4 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC8.97□□□□□ -0.97
Vpreb3D3Z6J4 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC8.97□□□□□ -0.97
Vpreb3D3Z6J4 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Vpreb3D3Z6J4 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Vpreb3D3Z6J4 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Vpreb3D3Z6J4 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Vpreb3D3Z6J4 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Vpreb3D3Z6J4 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Vpreb3D3Z6J4 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC8.97□□□□□ -0.97
Vpreb3D3Z6J4 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC8.97□□□□□ -0.97
Vpreb3D3Z6J4 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Vpreb3D3Z6J4 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Vpreb3D3Z6J4 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC8.97□□□□□ -0.97
Vpreb3D3Z6J4 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC8.97□□□□□ -0.97
Vpreb3D3Z6J4 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Vpreb3D3Z6J4 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Vpreb3D3Z6J4 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC8.97□□□□□ -0.97
Vpreb3D3Z6J4 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC8.97□□□□□ -0.97
Vpreb3D3Z6J4 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Vpreb3D3Z6J4 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC8.97□□□□□ -0.97
Vpreb3D3Z6J4 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Vpreb3D3Z6J4 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Vpreb3D3Z6J4 Nexmif-202ENSMUST00000087879 10891 ntAPPRIS P2 TSL 1 (best) BASIC8.97□□□□□ -0.97
Vpreb3D3Z6J4 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC8.97□□□□□ -0.97
Vpreb3D3Z6J4 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC8.97□□□□□ -0.97
Vpreb3D3Z6J4 Nexmif-203ENSMUST00000118314 11476 ntAPPRIS ALT2 TSL 1 (best) BASIC8.96□□□□□ -0.97
Vpreb3D3Z6J4 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC8.96□□□□□ -0.97
Vpreb3D3Z6J4 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
Vpreb3D3Z6J4 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
Vpreb3D3Z6J4 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC8.96□□□□□ -0.97
Vpreb3D3Z6J4 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC8.96□□□□□ -0.97
Vpreb3D3Z6J4 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC8.96□□□□□ -0.97
Vpreb3D3Z6J4 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC8.96□□□□□ -0.97
Vpreb3D3Z6J4 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC8.96□□□□□ -0.97
Vpreb3D3Z6J4 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC8.96□□□□□ -0.97
Vpreb3D3Z6J4 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC8.96□□□□□ -0.97
Vpreb3D3Z6J4 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC8.96□□□□□ -0.97
Vpreb3D3Z6J4 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
Vpreb3D3Z6J4 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC8.96□□□□□ -0.97
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms