Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Hfm1D3Z4R1 Gm13369-201ENSMUST00000119442 987 ntBASIC19.63■□□□□ 0.73
Hfm1D3Z4R1 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC19.63■□□□□ 0.73
Hfm1D3Z4R1 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC19.63■□□□□ 0.73
Hfm1D3Z4R1 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Hfm1D3Z4R1 Gm25261-201ENSMUST00000157416 134 ntBASIC19.63■□□□□ 0.73
Hfm1D3Z4R1 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Hfm1D3Z4R1 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Hfm1D3Z4R1 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Hfm1D3Z4R1 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC19.63■□□□□ 0.73
Hfm1D3Z4R1 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Hfm1D3Z4R1 Gm7993-201ENSMUST00000200970 1384 ntBASIC19.63■□□□□ 0.73
Hfm1D3Z4R1 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC19.63■□□□□ 0.73
Hfm1D3Z4R1 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Hfm1D3Z4R1 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Hfm1D3Z4R1 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC19.63■□□□□ 0.73
Hfm1D3Z4R1 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Hfm1D3Z4R1 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Hfm1D3Z4R1 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Hfm1D3Z4R1 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC19.63■□□□□ 0.73
Hfm1D3Z4R1 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Hfm1D3Z4R1 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Hfm1D3Z4R1 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Hfm1D3Z4R1 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Hfm1D3Z4R1 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Hfm1D3Z4R1 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Hfm1D3Z4R1 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
Hfm1D3Z4R1 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Hfm1D3Z4R1 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Hfm1D3Z4R1 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Hfm1D3Z4R1 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC19.62■□□□□ 0.73
Hfm1D3Z4R1 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Hfm1D3Z4R1 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Hfm1D3Z4R1 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Hfm1D3Z4R1 Gm17330-201ENSMUST00000221047 165 ntBASIC19.62■□□□□ 0.73
Hfm1D3Z4R1 AC126549.2-201ENSMUST00000223997 1976 ntBASIC19.62■□□□□ 0.73
Hfm1D3Z4R1 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Hfm1D3Z4R1 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Hfm1D3Z4R1 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Hfm1D3Z4R1 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Hfm1D3Z4R1 Rn7sk-201ENSMUST00000083103 331 ntBASIC19.62■□□□□ 0.73
Hfm1D3Z4R1 Gm26315-201ENSMUST00000083890 321 ntBASIC19.62■□□□□ 0.73
Hfm1D3Z4R1 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Hfm1D3Z4R1 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Hfm1D3Z4R1 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Hfm1D3Z4R1 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Hfm1D3Z4R1 CT010478.1-201ENSMUST00000220747 2787 ntBASIC19.62■□□□□ 0.73
Hfm1D3Z4R1 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Hfm1D3Z4R1 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Hfm1D3Z4R1 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Hfm1D3Z4R1 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Hfm1D3Z4R1 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC19.61■□□□□ 0.73
Hfm1D3Z4R1 Gm15544-201ENSMUST00000118776 1531 ntBASIC19.61■□□□□ 0.73
Hfm1D3Z4R1 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Hfm1D3Z4R1 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Hfm1D3Z4R1 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Hfm1D3Z4R1 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Hfm1D3Z4R1 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC19.61■□□□□ 0.73
Hfm1D3Z4R1 Mir877-201ENSMUST00000104738 85 ntBASIC19.61■□□□□ 0.73
Hfm1D3Z4R1 Gm12241-201ENSMUST00000118330 726 ntBASIC19.61■□□□□ 0.73
Hfm1D3Z4R1 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC19.61■□□□□ 0.73
Hfm1D3Z4R1 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Hfm1D3Z4R1 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC19.61■□□□□ 0.73
Hfm1D3Z4R1 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Hfm1D3Z4R1 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC19.61■□□□□ 0.73
Hfm1D3Z4R1 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC19.61■□□□□ 0.73
Hfm1D3Z4R1 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Hfm1D3Z4R1 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Hfm1D3Z4R1 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Hfm1D3Z4R1 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Hfm1D3Z4R1 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
Hfm1D3Z4R1 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Hfm1D3Z4R1 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Hfm1D3Z4R1 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC19.61■□□□□ 0.73
Hfm1D3Z4R1 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC19.61■□□□□ 0.73
Hfm1D3Z4R1 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Hfm1D3Z4R1 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Hfm1D3Z4R1 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC19.61■□□□□ 0.73
Hfm1D3Z4R1 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Hfm1D3Z4R1 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC19.6■□□□□ 0.73
Hfm1D3Z4R1 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Hfm1D3Z4R1 Gm11658-201ENSMUST00000120913 1008 ntBASIC19.6■□□□□ 0.73
Hfm1D3Z4R1 Gm2467-201ENSMUST00000182266 1010 ntBASIC19.6■□□□□ 0.73
Hfm1D3Z4R1 Gm6981-201ENSMUST00000182467 1008 ntBASIC19.6■□□□□ 0.73
Hfm1D3Z4R1 Mir7070-201ENSMUST00000183657 86 ntBASIC19.6■□□□□ 0.73
Hfm1D3Z4R1 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC19.6■□□□□ 0.73
Hfm1D3Z4R1 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC19.6■□□□□ 0.73
Hfm1D3Z4R1 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC19.6■□□□□ 0.73
Hfm1D3Z4R1 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Hfm1D3Z4R1 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Hfm1D3Z4R1 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Hfm1D3Z4R1 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Hfm1D3Z4R1 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Hfm1D3Z4R1 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC19.6■□□□□ 0.73
Hfm1D3Z4R1 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Hfm1D3Z4R1 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Hfm1D3Z4R1 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Hfm1D3Z4R1 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Hfm1D3Z4R1 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Hfm1D3Z4R1 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms