Protein–RNA interactions for Protein: D3YXG0

Hmcn1, Hemicentin-1, mousemouse

Predictions only

Length 5,634 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmcn1D3YXG0 Parvaos-201ENSMUST00000154848 1285 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
Hmcn1D3YXG0 Aamdc-213ENSMUST00000154853 883 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
Hmcn1D3YXG0 Rsph14-206ENSMUST00000166088 1203 ntAPPRIS P4 TSL 5 BASIC4.01□□□□□ -1.77
Hmcn1D3YXG0 Rsph14-207ENSMUST00000179546 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
Hmcn1D3YXG0 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC4.01□□□□□ -1.77
Hmcn1D3YXG0 Ly6e-207ENSMUST00000187606 735 ntAPPRIS P1 TSL 2 BASIC4.01□□□□□ -1.77
Hmcn1D3YXG0 Gm9136-201ENSMUST00000193368 454 ntBASIC4.01□□□□□ -1.77
Hmcn1D3YXG0 AC135469.1-201ENSMUST00000225984 772 ntBASIC4.01□□□□□ -1.77
Hmcn1D3YXG0 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Hmcn1D3YXG0 Rsph14-201ENSMUST00000009214 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
Hmcn1D3YXG0 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Hmcn1D3YXG0 Gm29114-201ENSMUST00000187100 2508 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
Hmcn1D3YXG0 Gm10447-201ENSMUST00000084653 2307 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
Hmcn1D3YXG0 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Hmcn1D3YXG0 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
Hmcn1D3YXG0 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Hmcn1D3YXG0 AC167669.2-201ENSMUST00000224417 1620 ntBASIC4.01□□□□□ -1.77
Hmcn1D3YXG0 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC4.01□□□□□ -1.77
Hmcn1D3YXG0 Gm13611-201ENSMUST00000118269 318 ntBASIC4.01□□□□□ -1.77
Hmcn1D3YXG0 Gm13665-201ENSMUST00000120830 528 ntBASIC4.01□□□□□ -1.77
Hmcn1D3YXG0 Defa-ps17-201ENSMUST00000121849 171 ntBASIC4.01□□□□□ -1.77
Hmcn1D3YXG0 Snhg3-202ENSMUST00000141090 581 ntTSL 2 BASIC4.01□□□□□ -1.77
Hmcn1D3YXG0 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC4.01□□□□□ -1.77
Hmcn1D3YXG0 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC4.01□□□□□ -1.77
Hmcn1D3YXG0 4930447N08Rik-203ENSMUST00000198879 1157 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
Hmcn1D3YXG0 AC140409.3-201ENSMUST00000215601 358 ntTSL 3 BASIC4.01□□□□□ -1.77
Hmcn1D3YXG0 Rasl11a-201ENSMUST00000031646 1126 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Hmcn1D3YXG0 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Hmcn1D3YXG0 Gm37429-201ENSMUST00000193807 1799 ntBASIC4.01□□□□□ -1.77
Hmcn1D3YXG0 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Hmcn1D3YXG0 Tmed5-205ENSMUST00000119437 3436 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
Hmcn1D3YXG0 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
Hmcn1D3YXG0 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Hmcn1D3YXG0 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC4.01□□□□□ -1.77
Hmcn1D3YXG0 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
Hmcn1D3YXG0 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
Hmcn1D3YXG0 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Hmcn1D3YXG0 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC4.01□□□□□ -1.77
Hmcn1D3YXG0 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC4.01□□□□□ -1.77
Hmcn1D3YXG0 Gm42967-201ENSMUST00000198647 2312 ntBASIC4.01□□□□□ -1.77
Hmcn1D3YXG0 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
Hmcn1D3YXG0 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
Hmcn1D3YXG0 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC4.01□□□□□ -1.77
Hmcn1D3YXG0 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC4.01□□□□□ -1.77
Hmcn1D3YXG0 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC4.01□□□□□ -1.77
Hmcn1D3YXG0 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC4.01□□□□□ -1.77
Hmcn1D3YXG0 Gm7809-201ENSMUST00000153199 742 ntBASIC4.01□□□□□ -1.77
Hmcn1D3YXG0 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
Hmcn1D3YXG0 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC4.01□□□□□ -1.77
Hmcn1D3YXG0 Gm5896-201ENSMUST00000189662 1024 ntBASIC4.01□□□□□ -1.77
Hmcn1D3YXG0 Gm43752-201ENSMUST00000198475 697 ntBASIC4.01□□□□□ -1.77
Hmcn1D3YXG0 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC4.01□□□□□ -1.77
Hmcn1D3YXG0 Pbld1-206ENSMUST00000219687 788 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
Hmcn1D3YXG0 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Hmcn1D3YXG0 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Hmcn1D3YXG0 Gm9962-201ENSMUST00000085241 321 ntTSL 5 BASIC4.01□□□□□ -1.77
Hmcn1D3YXG0 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC4.01□□□□□ -1.77
Hmcn1D3YXG0 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Hmcn1D3YXG0 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC4.01□□□□□ -1.77
Hmcn1D3YXG0 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Hmcn1D3YXG0 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
Hmcn1D3YXG0 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Hmcn1D3YXG0 Gm12289-201ENSMUST00000130860 2235 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
Hmcn1D3YXG0 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Hmcn1D3YXG0 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
Hmcn1D3YXG0 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC4.01□□□□□ -1.77
Hmcn1D3YXG0 Gm9062-201ENSMUST00000117712 727 ntBASIC4.01□□□□□ -1.77
Hmcn1D3YXG0 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC4.01□□□□□ -1.77
Hmcn1D3YXG0 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC4.01□□□□□ -1.77
Hmcn1D3YXG0 Gm29292-201ENSMUST00000186169 766 ntTSL 3 BASIC4.01□□□□□ -1.77
Hmcn1D3YXG0 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC4.01□□□□□ -1.77
Hmcn1D3YXG0 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Hmcn1D3YXG0 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Hmcn1D3YXG0 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
Hmcn1D3YXG0 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC4.01□□□□□ -1.77
Hmcn1D3YXG0 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC4.01□□□□□ -1.77
Hmcn1D3YXG0 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
Hmcn1D3YXG0 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
Hmcn1D3YXG0 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
Hmcn1D3YXG0 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC4.01□□□□□ -1.77
Hmcn1D3YXG0 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC4.01□□□□□ -1.77
Hmcn1D3YXG0 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Hmcn1D3YXG0 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Hmcn1D3YXG0 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
Hmcn1D3YXG0 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Hmcn1D3YXG0 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Hmcn1D3YXG0 Gcg-201ENSMUST00000102733 1088 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Hmcn1D3YXG0 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC4.01□□□□□ -1.77
Hmcn1D3YXG0 Olfr22-ps1-201ENSMUST00000115991 1237 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
Hmcn1D3YXG0 Gm11979-201ENSMUST00000119629 743 ntBASIC4.01□□□□□ -1.77
Hmcn1D3YXG0 Gm5909-201ENSMUST00000119768 1281 ntBASIC4.01□□□□□ -1.77
Hmcn1D3YXG0 Sox5os3-201ENSMUST00000139351 906 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
Hmcn1D3YXG0 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC4.01□□□□□ -1.77
Hmcn1D3YXG0 Gm17040-202ENSMUST00000170597 889 ntBASIC4.01□□□□□ -1.77
Hmcn1D3YXG0 2610316D01Rik-201ENSMUST00000181047 924 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
Hmcn1D3YXG0 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC4.01□□□□□ -1.77
Hmcn1D3YXG0 1810059H22Rik-207ENSMUST00000204809 289 ntTSL 3 BASIC4.01□□□□□ -1.77
Hmcn1D3YXG0 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC4.01□□□□□ -1.77
Hmcn1D3YXG0 Gm8712-201ENSMUST00000221090 701 ntBASIC4.01□□□□□ -1.77
Hmcn1D3YXG0 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC4.01□□□□□ -1.77
Retrieved 100 of 76,532 protein–RNA pairs in 47.4 ms