Protein–RNA interactions for Protein: B2RQC2

Usp42, Ubiquitin carboxyl-terminal hydrolase 42, mousemouse

Known RBP Predictions only

Length 1,324 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp42B2RQC2 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Usp42B2RQC2 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Usp42B2RQC2 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Usp42B2RQC2 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Usp42B2RQC2 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Usp42B2RQC2 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Usp42B2RQC2 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Usp42B2RQC2 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Usp42B2RQC2 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Usp42B2RQC2 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Usp42B2RQC2 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Usp42B2RQC2 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Usp42B2RQC2 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Usp42B2RQC2 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Usp42B2RQC2 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Usp42B2RQC2 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Usp42B2RQC2 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Usp42B2RQC2 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Usp42B2RQC2 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Usp42B2RQC2 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Usp42B2RQC2 Gm7820-201ENSMUST00000121012 1052 ntBASIC16.61■□□□□ 0.25
Usp42B2RQC2 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Usp42B2RQC2 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Usp42B2RQC2 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC16.61■□□□□ 0.25
Usp42B2RQC2 Gm33320-201ENSMUST00000192232 530 ntBASIC16.61■□□□□ 0.25
Usp42B2RQC2 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Usp42B2RQC2 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Usp42B2RQC2 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Usp42B2RQC2 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Usp42B2RQC2 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Usp42B2RQC2 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Usp42B2RQC2 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Usp42B2RQC2 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Usp42B2RQC2 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC16.6■□□□□ 0.25
Usp42B2RQC2 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Usp42B2RQC2 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Usp42B2RQC2 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Usp42B2RQC2 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Usp42B2RQC2 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Usp42B2RQC2 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Usp42B2RQC2 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Usp42B2RQC2 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Usp42B2RQC2 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
Usp42B2RQC2 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Usp42B2RQC2 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Usp42B2RQC2 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Usp42B2RQC2 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
Usp42B2RQC2 Cd63-ps-201ENSMUST00000145417 875 ntBASIC16.6■□□□□ 0.25
Usp42B2RQC2 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Usp42B2RQC2 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Usp42B2RQC2 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
Usp42B2RQC2 Gm37714-201ENSMUST00000194742 342 ntBASIC16.6■□□□□ 0.25
Usp42B2RQC2 AC154806.6-201ENSMUST00000228192 202 ntBASIC16.6■□□□□ 0.25
Usp42B2RQC2 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Usp42B2RQC2 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Usp42B2RQC2 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Usp42B2RQC2 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Usp42B2RQC2 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Usp42B2RQC2 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Usp42B2RQC2 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Usp42B2RQC2 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Usp42B2RQC2 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Usp42B2RQC2 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Usp42B2RQC2 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Usp42B2RQC2 Gm28182-201ENSMUST00000188354 2477 ntBASIC16.6■□□□□ 0.25
Usp42B2RQC2 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC16.6■□□□□ 0.25
Usp42B2RQC2 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Usp42B2RQC2 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Usp42B2RQC2 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Usp42B2RQC2 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Usp42B2RQC2 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Usp42B2RQC2 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Usp42B2RQC2 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Usp42B2RQC2 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Usp42B2RQC2 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC16.59■□□□□ 0.25
Usp42B2RQC2 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Usp42B2RQC2 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Usp42B2RQC2 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Usp42B2RQC2 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Usp42B2RQC2 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Usp42B2RQC2 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Usp42B2RQC2 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC16.59■□□□□ 0.25
Usp42B2RQC2 Gm15460-201ENSMUST00000118147 391 ntBASIC16.59■□□□□ 0.25
Usp42B2RQC2 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Usp42B2RQC2 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC16.59■□□□□ 0.25
Usp42B2RQC2 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC16.59■□□□□ 0.25
Usp42B2RQC2 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC16.59■□□□□ 0.25
Usp42B2RQC2 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Usp42B2RQC2 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC16.59■□□□□ 0.25
Usp42B2RQC2 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC16.59■□□□□ 0.25
Usp42B2RQC2 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Usp42B2RQC2 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Usp42B2RQC2 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Usp42B2RQC2 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Usp42B2RQC2 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Usp42B2RQC2 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Usp42B2RQC2 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Usp42B2RQC2 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Usp42B2RQC2 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Usp42B2RQC2 Gm12020-201ENSMUST00000119030 2042 ntBASIC16.58■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms