Protein–RNA interactions for Protein: B1AVM1

Gm12887, Predicted gene 12887, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12887B1AVM1 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Gm12887B1AVM1 Rbfox2-207ENSMUST00000227533 1041 ntBASIC11.51□□□□□ -0.57
Gm12887B1AVM1 Otx2os1-206ENSMUST00000228153 787 ntBASIC11.51□□□□□ -0.57
Gm12887B1AVM1 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Gm12887B1AVM1 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Gm12887B1AVM1 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Gm12887B1AVM1 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Gm12887B1AVM1 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC11.51□□□□□ -0.57
Gm12887B1AVM1 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Gm12887B1AVM1 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Gm12887B1AVM1 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Gm12887B1AVM1 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Gm12887B1AVM1 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Gm12887B1AVM1 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC11.51□□□□□ -0.57
Gm12887B1AVM1 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Gm12887B1AVM1 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Gm12887B1AVM1 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Gm12887B1AVM1 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC11.51□□□□□ -0.57
Gm12887B1AVM1 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Gm12887B1AVM1 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Gm12887B1AVM1 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Gm12887B1AVM1 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Gm12887B1AVM1 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC11.5□□□□□ -0.57
Gm12887B1AVM1 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Gm12887B1AVM1 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Gm12887B1AVM1 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Gm12887B1AVM1 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Gm12887B1AVM1 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Gm12887B1AVM1 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Gm12887B1AVM1 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Gm12887B1AVM1 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Gm12887B1AVM1 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Gm12887B1AVM1 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC11.5□□□□□ -0.57
Gm12887B1AVM1 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Gm12887B1AVM1 AC131743.5-201ENSMUST00000220775 1618 ntBASIC11.5□□□□□ -0.57
Gm12887B1AVM1 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC11.5□□□□□ -0.57
Gm12887B1AVM1 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Gm12887B1AVM1 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Gm12887B1AVM1 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Gm12887B1AVM1 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC11.5□□□□□ -0.57
Gm12887B1AVM1 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
Gm12887B1AVM1 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC11.5□□□□□ -0.57
Gm12887B1AVM1 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC11.5□□□□□ -0.57
Gm12887B1AVM1 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Gm12887B1AVM1 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC11.5□□□□□ -0.57
Gm12887B1AVM1 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Gm12887B1AVM1 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Gm12887B1AVM1 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Gm12887B1AVM1 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Gm12887B1AVM1 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Gm12887B1AVM1 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Gm12887B1AVM1 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Gm12887B1AVM1 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Gm12887B1AVM1 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Gm12887B1AVM1 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Gm12887B1AVM1 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Gm12887B1AVM1 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Gm12887B1AVM1 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Gm12887B1AVM1 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC11.49□□□□□ -0.57
Gm12887B1AVM1 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC11.49□□□□□ -0.57
Gm12887B1AVM1 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Gm12887B1AVM1 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Gm12887B1AVM1 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
Gm12887B1AVM1 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Gm12887B1AVM1 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Gm12887B1AVM1 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Gm12887B1AVM1 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Gm12887B1AVM1 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Gm12887B1AVM1 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC11.49□□□□□ -0.57
Gm12887B1AVM1 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Gm12887B1AVM1 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Gm12887B1AVM1 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Gm12887B1AVM1 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Gm12887B1AVM1 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Gm12887B1AVM1 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Gm12887B1AVM1 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC11.49□□□□□ -0.57
Gm12887B1AVM1 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Gm12887B1AVM1 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Gm12887B1AVM1 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Gm12887B1AVM1 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC11.49□□□□□ -0.57
Gm12887B1AVM1 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC11.49□□□□□ -0.57
Gm12887B1AVM1 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC11.49□□□□□ -0.57
Gm12887B1AVM1 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC11.49□□□□□ -0.57
Gm12887B1AVM1 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Gm12887B1AVM1 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC11.49□□□□□ -0.57
Gm12887B1AVM1 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Gm12887B1AVM1 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Gm12887B1AVM1 Gm18041-201ENSMUST00000218210 618 ntBASIC11.49□□□□□ -0.57
Gm12887B1AVM1 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Gm12887B1AVM1 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Gm12887B1AVM1 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Gm12887B1AVM1 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Gm12887B1AVM1 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Gm12887B1AVM1 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Gm12887B1AVM1 AC154262.2-201ENSMUST00000224310 2293 ntBASIC11.49□□□□□ -0.57
Gm12887B1AVM1 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC11.49□□□□□ -0.57
Gm12887B1AVM1 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Gm12887B1AVM1 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Gm12887B1AVM1 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Gm12887B1AVM1 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms