Protein–RNA interactions for Protein: A0N8R1

Trav12-1, T cell receptor alpha variable 12-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-1A0N8R1 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav12-1A0N8R1 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav12-1A0N8R1 Gm5639-201ENSMUST00000122305 2403 ntBASIC11.88□□□□□ -0.51
Trav12-1A0N8R1 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav12-1A0N8R1 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC11.88□□□□□ -0.51
Trav12-1A0N8R1 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav12-1A0N8R1 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav12-1A0N8R1 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav12-1A0N8R1 Gm18244-201ENSMUST00000219747 1566 ntBASIC11.88□□□□□ -0.51
Trav12-1A0N8R1 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav12-1A0N8R1 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav12-1A0N8R1 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav12-1A0N8R1 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Trav12-1A0N8R1 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC11.87□□□□□ -0.51
Trav12-1A0N8R1 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav12-1A0N8R1 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trav12-1A0N8R1 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trav12-1A0N8R1 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav12-1A0N8R1 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav12-1A0N8R1 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav12-1A0N8R1 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav12-1A0N8R1 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav12-1A0N8R1 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav12-1A0N8R1 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav12-1A0N8R1 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav12-1A0N8R1 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC11.87□□□□□ -0.51
Trav12-1A0N8R1 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trav12-1A0N8R1 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav12-1A0N8R1 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trav12-1A0N8R1 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trav12-1A0N8R1 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC11.87□□□□□ -0.51
Trav12-1A0N8R1 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC11.87□□□□□ -0.51
Trav12-1A0N8R1 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC11.87□□□□□ -0.51
Trav12-1A0N8R1 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Trav12-1A0N8R1 AC154222.1-201ENSMUST00000223882 475 ntBASIC11.87□□□□□ -0.51
Trav12-1A0N8R1 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trav12-1A0N8R1 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav12-1A0N8R1 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav12-1A0N8R1 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav12-1A0N8R1 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC11.87□□□□□ -0.51
Trav12-1A0N8R1 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav12-1A0N8R1 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav12-1A0N8R1 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav12-1A0N8R1 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trav12-1A0N8R1 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav12-1A0N8R1 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav12-1A0N8R1 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC11.87□□□□□ -0.51
Trav12-1A0N8R1 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trav12-1A0N8R1 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav12-1A0N8R1 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav12-1A0N8R1 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trav12-1A0N8R1 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav12-1A0N8R1 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trav12-1A0N8R1 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav12-1A0N8R1 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Trav12-1A0N8R1 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav12-1A0N8R1 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav12-1A0N8R1 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trav12-1A0N8R1 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav12-1A0N8R1 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav12-1A0N8R1 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav12-1A0N8R1 Gm27920-201ENSMUST00000183953 96 ntBASIC11.86□□□□□ -0.51
Trav12-1A0N8R1 Gm2651-201ENSMUST00000203560 838 ntBASIC11.86□□□□□ -0.51
Trav12-1A0N8R1 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC11.86□□□□□ -0.51
Trav12-1A0N8R1 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC11.86□□□□□ -0.51
Trav12-1A0N8R1 AC154572.2-201ENSMUST00000225105 997 ntBASIC11.86□□□□□ -0.51
Trav12-1A0N8R1 AC159295.1-201ENSMUST00000225326 940 ntBASIC11.86□□□□□ -0.51
Trav12-1A0N8R1 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav12-1A0N8R1 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trav12-1A0N8R1 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav12-1A0N8R1 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trav12-1A0N8R1 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav12-1A0N8R1 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC11.86□□□□□ -0.51
Trav12-1A0N8R1 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav12-1A0N8R1 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav12-1A0N8R1 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav12-1A0N8R1 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav12-1A0N8R1 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav12-1A0N8R1 AC115735.4-201ENSMUST00000227460 1944 ntBASIC11.86□□□□□ -0.51
Trav12-1A0N8R1 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav12-1A0N8R1 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trav12-1A0N8R1 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav12-1A0N8R1 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav12-1A0N8R1 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav12-1A0N8R1 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav12-1A0N8R1 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trav12-1A0N8R1 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav12-1A0N8R1 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav12-1A0N8R1 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav12-1A0N8R1 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav12-1A0N8R1 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC11.85□□□□□ -0.51
Trav12-1A0N8R1 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav12-1A0N8R1 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav12-1A0N8R1 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trav12-1A0N8R1 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Trav12-1A0N8R1 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Trav12-1A0N8R1 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav12-1A0N8R1 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav12-1A0N8R1 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav12-1A0N8R1 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 48.2 ms