Protein–RNA interactions for Protein: A0AUP1

Ccdc112, Coiled-coil domain-containing protein 112, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc112A0AUP1 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Ccdc112A0AUP1 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ccdc112A0AUP1 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ccdc112A0AUP1 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ccdc112A0AUP1 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ccdc112A0AUP1 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ccdc112A0AUP1 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC16.24■□□□□ 0.19
Ccdc112A0AUP1 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC16.24■□□□□ 0.19
Ccdc112A0AUP1 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ccdc112A0AUP1 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
Ccdc112A0AUP1 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC16.24■□□□□ 0.19
Ccdc112A0AUP1 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC16.24■□□□□ 0.19
Ccdc112A0AUP1 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Ccdc112A0AUP1 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Ccdc112A0AUP1 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ccdc112A0AUP1 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ccdc112A0AUP1 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ccdc112A0AUP1 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ccdc112A0AUP1 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ccdc112A0AUP1 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ccdc112A0AUP1 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ccdc112A0AUP1 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC16.23■□□□□ 0.19
Ccdc112A0AUP1 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ccdc112A0AUP1 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ccdc112A0AUP1 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ccdc112A0AUP1 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ccdc112A0AUP1 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC16.23■□□□□ 0.19
Ccdc112A0AUP1 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Ccdc112A0AUP1 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ccdc112A0AUP1 Gm11543-201ENSMUST00000120758 370 ntBASIC16.23■□□□□ 0.19
Ccdc112A0AUP1 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC16.23■□□□□ 0.19
Ccdc112A0AUP1 Gm1401-201ENSMUST00000122048 772 ntBASIC16.23■□□□□ 0.19
Ccdc112A0AUP1 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Ccdc112A0AUP1 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC16.23■□□□□ 0.19
Ccdc112A0AUP1 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC16.23■□□□□ 0.19
Ccdc112A0AUP1 AC174742.1-201ENSMUST00000218272 304 ntBASIC16.23■□□□□ 0.19
Ccdc112A0AUP1 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ccdc112A0AUP1 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ccdc112A0AUP1 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ccdc112A0AUP1 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ccdc112A0AUP1 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ccdc112A0AUP1 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ccdc112A0AUP1 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ccdc112A0AUP1 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ccdc112A0AUP1 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC16.23■□□□□ 0.19
Ccdc112A0AUP1 Gm30238-201ENSMUST00000195528 2603 ntBASIC16.23■□□□□ 0.19
Ccdc112A0AUP1 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ccdc112A0AUP1 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ccdc112A0AUP1 AC115735.4-201ENSMUST00000227460 1944 ntBASIC16.23■□□□□ 0.19
Ccdc112A0AUP1 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ccdc112A0AUP1 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Ccdc112A0AUP1 Gm15889-202ENSMUST00000212669 2443 ntBASIC16.23■□□□□ 0.19
Ccdc112A0AUP1 CT030684.3-201ENSMUST00000227308 2445 ntBASIC16.23■□□□□ 0.19
Ccdc112A0AUP1 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Ccdc112A0AUP1 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Ccdc112A0AUP1 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Ccdc112A0AUP1 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ccdc112A0AUP1 AC126549.2-201ENSMUST00000223997 1976 ntBASIC16.22■□□□□ 0.19
Ccdc112A0AUP1 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ccdc112A0AUP1 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Ccdc112A0AUP1 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ccdc112A0AUP1 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ccdc112A0AUP1 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Ccdc112A0AUP1 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ccdc112A0AUP1 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ccdc112A0AUP1 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ccdc112A0AUP1 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ccdc112A0AUP1 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ccdc112A0AUP1 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ccdc112A0AUP1 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Ccdc112A0AUP1 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ccdc112A0AUP1 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC16.22■□□□□ 0.19
Ccdc112A0AUP1 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Ccdc112A0AUP1 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Ccdc112A0AUP1 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Ccdc112A0AUP1 Gm12882-201ENSMUST00000121696 517 ntBASIC16.22■□□□□ 0.19
Ccdc112A0AUP1 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ccdc112A0AUP1 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ccdc112A0AUP1 Mir8117-201ENSMUST00000184773 107 ntBASIC16.22■□□□□ 0.19
Ccdc112A0AUP1 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Ccdc112A0AUP1 Gm20553-201ENSMUST00000204205 844 ntBASIC16.22■□□□□ 0.19
Ccdc112A0AUP1 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Ccdc112A0AUP1 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC16.22■□□□□ 0.19
Ccdc112A0AUP1 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ccdc112A0AUP1 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ccdc112A0AUP1 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Ccdc112A0AUP1 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ccdc112A0AUP1 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ccdc112A0AUP1 Matn2-206ENSMUST00000228570 2798 ntBASIC16.22■□□□□ 0.19
Ccdc112A0AUP1 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC16.22■□□□□ 0.19
Ccdc112A0AUP1 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ccdc112A0AUP1 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ccdc112A0AUP1 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ccdc112A0AUP1 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ccdc112A0AUP1 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ccdc112A0AUP1 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ccdc112A0AUP1 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ccdc112A0AUP1 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ccdc112A0AUP1 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Ccdc112A0AUP1 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms