Protein–RNA interactions for Protein: A0A075B656

Trav18, T cell receptor alpha variable 18 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav18A0A075B656 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav18A0A075B656 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav18A0A075B656 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Trav18A0A075B656 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav18A0A075B656 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trav18A0A075B656 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav18A0A075B656 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav18A0A075B656 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav18A0A075B656 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trav18A0A075B656 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav18A0A075B656 Matn2-206ENSMUST00000228570 2798 ntBASIC11.66□□□□□ -0.54
Trav18A0A075B656 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav18A0A075B656 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav18A0A075B656 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Trav18A0A075B656 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav18A0A075B656 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav18A0A075B656 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trav18A0A075B656 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav18A0A075B656 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Trav18A0A075B656 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Trav18A0A075B656 Gm27920-201ENSMUST00000183953 96 ntBASIC11.66□□□□□ -0.54
Trav18A0A075B656 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Trav18A0A075B656 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav18A0A075B656 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav18A0A075B656 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC11.66□□□□□ -0.54
Trav18A0A075B656 AC154572.2-201ENSMUST00000225105 997 ntBASIC11.66□□□□□ -0.54
Trav18A0A075B656 AC159295.1-201ENSMUST00000225326 940 ntBASIC11.66□□□□□ -0.54
Trav18A0A075B656 Psmb5-202ENSMUST00000227257 622 ntBASIC11.66□□□□□ -0.54
Trav18A0A075B656 Gm7461-201ENSMUST00000058918 827 ntBASIC11.66□□□□□ -0.54
Trav18A0A075B656 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Trav18A0A075B656 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Trav18A0A075B656 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trav18A0A075B656 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trav18A0A075B656 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Trav18A0A075B656 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav18A0A075B656 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav18A0A075B656 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav18A0A075B656 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav18A0A075B656 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav18A0A075B656 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav18A0A075B656 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav18A0A075B656 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav18A0A075B656 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trav18A0A075B656 Gm6159-201ENSMUST00000191249 1724 ntBASIC11.66□□□□□ -0.54
Trav18A0A075B656 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav18A0A075B656 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav18A0A075B656 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav18A0A075B656 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav18A0A075B656 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav18A0A075B656 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trav18A0A075B656 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav18A0A075B656 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav18A0A075B656 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav18A0A075B656 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav18A0A075B656 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav18A0A075B656 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav18A0A075B656 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav18A0A075B656 Gm30238-201ENSMUST00000195528 2603 ntBASIC11.65□□□□□ -0.54
Trav18A0A075B656 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav18A0A075B656 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trav18A0A075B656 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav18A0A075B656 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav18A0A075B656 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trav18A0A075B656 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav18A0A075B656 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav18A0A075B656 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trav18A0A075B656 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC11.65□□□□□ -0.54
Trav18A0A075B656 Gm12892-201ENSMUST00000117367 1146 ntBASIC11.65□□□□□ -0.54
Trav18A0A075B656 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trav18A0A075B656 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav18A0A075B656 Gm44945-201ENSMUST00000206764 1187 ntBASIC11.65□□□□□ -0.54
Trav18A0A075B656 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trav18A0A075B656 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav18A0A075B656 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav18A0A075B656 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Trav18A0A075B656 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav18A0A075B656 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav18A0A075B656 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav18A0A075B656 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC11.65□□□□□ -0.54
Trav18A0A075B656 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav18A0A075B656 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav18A0A075B656 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav18A0A075B656 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Trav18A0A075B656 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav18A0A075B656 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav18A0A075B656 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Trav18A0A075B656 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC11.64□□□□□ -0.55
Trav18A0A075B656 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC11.64□□□□□ -0.55
Trav18A0A075B656 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav18A0A075B656 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trav18A0A075B656 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC11.64□□□□□ -0.55
Trav18A0A075B656 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC11.64□□□□□ -0.55
Trav18A0A075B656 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC11.64□□□□□ -0.55
Trav18A0A075B656 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav18A0A075B656 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Trav18A0A075B656 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav18A0A075B656 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav18A0A075B656 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav18A0A075B656 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav18A0A075B656 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms