Protein–RNA interactions for Protein: S4R2K0

Pdf, Peptide deformylase, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdfS4R2K0 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
PdfS4R2K0 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
PdfS4R2K0 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
PdfS4R2K0 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
PdfS4R2K0 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
PdfS4R2K0 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
PdfS4R2K0 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
PdfS4R2K0 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
PdfS4R2K0 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
PdfS4R2K0 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
PdfS4R2K0 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
PdfS4R2K0 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC10.95□□□□□ -0.66
PdfS4R2K0 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
PdfS4R2K0 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
PdfS4R2K0 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
PdfS4R2K0 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
PdfS4R2K0 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
PdfS4R2K0 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC10.94□□□□□ -0.66
PdfS4R2K0 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC10.94□□□□□ -0.66
PdfS4R2K0 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
PdfS4R2K0 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
PdfS4R2K0 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
PdfS4R2K0 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
PdfS4R2K0 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
PdfS4R2K0 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
PdfS4R2K0 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
PdfS4R2K0 Gm7230-201ENSMUST00000173026 815 ntBASIC10.94□□□□□ -0.66
PdfS4R2K0 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
PdfS4R2K0 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC10.94□□□□□ -0.66
PdfS4R2K0 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC10.94□□□□□ -0.66
PdfS4R2K0 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC10.94□□□□□ -0.66
PdfS4R2K0 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
PdfS4R2K0 CT009510.1-201ENSMUST00000227972 270 ntBASIC10.94□□□□□ -0.66
PdfS4R2K0 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
PdfS4R2K0 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
PdfS4R2K0 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
PdfS4R2K0 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
PdfS4R2K0 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
PdfS4R2K0 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
PdfS4R2K0 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC10.94□□□□□ -0.66
PdfS4R2K0 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
PdfS4R2K0 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
PdfS4R2K0 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC10.94□□□□□ -0.66
PdfS4R2K0 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
PdfS4R2K0 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
PdfS4R2K0 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
PdfS4R2K0 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
PdfS4R2K0 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
PdfS4R2K0 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC10.94□□□□□ -0.66
PdfS4R2K0 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
PdfS4R2K0 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
PdfS4R2K0 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
PdfS4R2K0 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
PdfS4R2K0 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
PdfS4R2K0 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC10.93□□□□□ -0.66
PdfS4R2K0 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
PdfS4R2K0 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC10.93□□□□□ -0.66
PdfS4R2K0 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
PdfS4R2K0 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
PdfS4R2K0 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
PdfS4R2K0 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
PdfS4R2K0 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC10.93□□□□□ -0.66
PdfS4R2K0 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
PdfS4R2K0 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
PdfS4R2K0 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
PdfS4R2K0 Gm25990-201ENSMUST00000102440 86 ntBASIC10.93□□□□□ -0.66
PdfS4R2K0 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC10.93□□□□□ -0.66
PdfS4R2K0 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
PdfS4R2K0 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC10.93□□□□□ -0.66
PdfS4R2K0 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC10.93□□□□□ -0.66
PdfS4R2K0 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC10.93□□□□□ -0.66
PdfS4R2K0 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC10.93□□□□□ -0.66
PdfS4R2K0 Mxra8os-201ENSMUST00000097740 687 ntBASIC10.93□□□□□ -0.66
PdfS4R2K0 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
PdfS4R2K0 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC10.93□□□□□ -0.66
PdfS4R2K0 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
PdfS4R2K0 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
PdfS4R2K0 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC10.93□□□□□ -0.66
PdfS4R2K0 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC10.93□□□□□ -0.66
PdfS4R2K0 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
PdfS4R2K0 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
PdfS4R2K0 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC10.93□□□□□ -0.66
PdfS4R2K0 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
PdfS4R2K0 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
PdfS4R2K0 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
PdfS4R2K0 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
PdfS4R2K0 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC10.92□□□□□ -0.66
PdfS4R2K0 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
PdfS4R2K0 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
PdfS4R2K0 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
PdfS4R2K0 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
PdfS4R2K0 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC10.92□□□□□ -0.66
PdfS4R2K0 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
PdfS4R2K0 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
PdfS4R2K0 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
PdfS4R2K0 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
PdfS4R2K0 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC10.92□□□□□ -0.66
PdfS4R2K0 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
PdfS4R2K0 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
PdfS4R2K0 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms