Protein–RNA interactions for Protein: Q9WVL1

Ap4s1, AP-4 complex subunit sigma-1, mousemouse

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ap4s1Q9WVL1 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ap4s1Q9WVL1 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Ap4s1Q9WVL1 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ap4s1Q9WVL1 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ap4s1Q9WVL1 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ap4s1Q9WVL1 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ap4s1Q9WVL1 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ap4s1Q9WVL1 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ap4s1Q9WVL1 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ap4s1Q9WVL1 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ap4s1Q9WVL1 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ap4s1Q9WVL1 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC13.65□□□□□ -0.23
Ap4s1Q9WVL1 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.23
Ap4s1Q9WVL1 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ap4s1Q9WVL1 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ap4s1Q9WVL1 Gm14371-201ENSMUST00000138925 1518 ntBASIC13.64□□□□□ -0.23
Ap4s1Q9WVL1 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Ap4s1Q9WVL1 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ap4s1Q9WVL1 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ap4s1Q9WVL1 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
Ap4s1Q9WVL1 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Ap4s1Q9WVL1 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC13.64□□□□□ -0.23
Ap4s1Q9WVL1 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ap4s1Q9WVL1 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ap4s1Q9WVL1 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ap4s1Q9WVL1 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ap4s1Q9WVL1 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ap4s1Q9WVL1 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Ap4s1Q9WVL1 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ap4s1Q9WVL1 AC154262.2-201ENSMUST00000224310 2293 ntBASIC13.64□□□□□ -0.23
Ap4s1Q9WVL1 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Ap4s1Q9WVL1 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Ap4s1Q9WVL1 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ap4s1Q9WVL1 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ap4s1Q9WVL1 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ap4s1Q9WVL1 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC13.64□□□□□ -0.23
Ap4s1Q9WVL1 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC13.64□□□□□ -0.23
Ap4s1Q9WVL1 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Ap4s1Q9WVL1 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC13.64□□□□□ -0.23
Ap4s1Q9WVL1 Gm4691-201ENSMUST00000182339 1000 ntBASIC13.64□□□□□ -0.23
Ap4s1Q9WVL1 Mir6982-201ENSMUST00000184354 68 ntBASIC13.64□□□□□ -0.23
Ap4s1Q9WVL1 Gm2451-201ENSMUST00000199447 999 ntBASIC13.64□□□□□ -0.23
Ap4s1Q9WVL1 Gm10290-201ENSMUST00000200451 999 ntBASIC13.64□□□□□ -0.23
Ap4s1Q9WVL1 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Ap4s1Q9WVL1 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Ap4s1Q9WVL1 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Ap4s1Q9WVL1 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ap4s1Q9WVL1 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ap4s1Q9WVL1 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Ap4s1Q9WVL1 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ap4s1Q9WVL1 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ap4s1Q9WVL1 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC13.64□□□□□ -0.23
Ap4s1Q9WVL1 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ap4s1Q9WVL1 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ap4s1Q9WVL1 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ap4s1Q9WVL1 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC13.64□□□□□ -0.23
Ap4s1Q9WVL1 AC131743.5-201ENSMUST00000220775 1618 ntBASIC13.64□□□□□ -0.23
Ap4s1Q9WVL1 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ap4s1Q9WVL1 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Ap4s1Q9WVL1 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ap4s1Q9WVL1 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ap4s1Q9WVL1 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Ap4s1Q9WVL1 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ap4s1Q9WVL1 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ap4s1Q9WVL1 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ap4s1Q9WVL1 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ap4s1Q9WVL1 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Ap4s1Q9WVL1 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ap4s1Q9WVL1 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Ap4s1Q9WVL1 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ap4s1Q9WVL1 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ap4s1Q9WVL1 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ap4s1Q9WVL1 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ap4s1Q9WVL1 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC13.63□□□□□ -0.23
Ap4s1Q9WVL1 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ap4s1Q9WVL1 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Ap4s1Q9WVL1 Gm12644-201ENSMUST00000119935 606 ntBASIC13.63□□□□□ -0.23
Ap4s1Q9WVL1 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC13.63□□□□□ -0.23
Ap4s1Q9WVL1 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ap4s1Q9WVL1 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ap4s1Q9WVL1 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ap4s1Q9WVL1 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Ap4s1Q9WVL1 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC13.63□□□□□ -0.23
Ap4s1Q9WVL1 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC13.63□□□□□ -0.23
Ap4s1Q9WVL1 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ap4s1Q9WVL1 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ap4s1Q9WVL1 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ap4s1Q9WVL1 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC13.63□□□□□ -0.23
Ap4s1Q9WVL1 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ap4s1Q9WVL1 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Ap4s1Q9WVL1 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ap4s1Q9WVL1 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Ap4s1Q9WVL1 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ap4s1Q9WVL1 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Ap4s1Q9WVL1 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Ap4s1Q9WVL1 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ap4s1Q9WVL1 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Ap4s1Q9WVL1 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Ap4s1Q9WVL1 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ap4s1Q9WVL1 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms