Protein–RNA interactions for Protein: Q9QZM3

Clcf1, Cardiotrophin-like cytokine factor 1, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcf1Q9QZM3 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Clcf1Q9QZM3 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Clcf1Q9QZM3 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Clcf1Q9QZM3 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Clcf1Q9QZM3 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC12.96□□□□□ -0.33
Clcf1Q9QZM3 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Clcf1Q9QZM3 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Clcf1Q9QZM3 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Clcf1Q9QZM3 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Clcf1Q9QZM3 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Clcf1Q9QZM3 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Clcf1Q9QZM3 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Clcf1Q9QZM3 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Clcf1Q9QZM3 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Clcf1Q9QZM3 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Clcf1Q9QZM3 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC12.96□□□□□ -0.33
Clcf1Q9QZM3 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Clcf1Q9QZM3 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Clcf1Q9QZM3 Gm8749-201ENSMUST00000117737 331 ntBASIC12.96□□□□□ -0.33
Clcf1Q9QZM3 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Clcf1Q9QZM3 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Clcf1Q9QZM3 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC12.96□□□□□ -0.33
Clcf1Q9QZM3 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC12.96□□□□□ -0.33
Clcf1Q9QZM3 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Clcf1Q9QZM3 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC12.96□□□□□ -0.33
Clcf1Q9QZM3 Gm37277-201ENSMUST00000194052 1111 ntBASIC12.96□□□□□ -0.33
Clcf1Q9QZM3 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Clcf1Q9QZM3 Gm45098-201ENSMUST00000207179 657 ntBASIC12.96□□□□□ -0.33
Clcf1Q9QZM3 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Clcf1Q9QZM3 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC12.96□□□□□ -0.33
Clcf1Q9QZM3 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Clcf1Q9QZM3 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Clcf1Q9QZM3 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Clcf1Q9QZM3 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Clcf1Q9QZM3 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Clcf1Q9QZM3 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Clcf1Q9QZM3 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Clcf1Q9QZM3 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Clcf1Q9QZM3 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC12.96□□□□□ -0.34
Clcf1Q9QZM3 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Clcf1Q9QZM3 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Clcf1Q9QZM3 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
Clcf1Q9QZM3 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Clcf1Q9QZM3 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.34
Clcf1Q9QZM3 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Clcf1Q9QZM3 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC12.96□□□□□ -0.34
Clcf1Q9QZM3 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Clcf1Q9QZM3 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC12.95□□□□□ -0.34
Clcf1Q9QZM3 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Clcf1Q9QZM3 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC12.95□□□□□ -0.34
Clcf1Q9QZM3 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Clcf1Q9QZM3 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Clcf1Q9QZM3 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Clcf1Q9QZM3 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Clcf1Q9QZM3 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Clcf1Q9QZM3 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Clcf1Q9QZM3 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Clcf1Q9QZM3 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Clcf1Q9QZM3 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Clcf1Q9QZM3 Gm6539-201ENSMUST00000119157 1064 ntBASIC12.95□□□□□ -0.34
Clcf1Q9QZM3 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Clcf1Q9QZM3 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Clcf1Q9QZM3 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC12.95□□□□□ -0.34
Clcf1Q9QZM3 Gm27618-201ENSMUST00000183671 60 ntBASIC12.95□□□□□ -0.34
Clcf1Q9QZM3 Gm18766-201ENSMUST00000189811 808 ntBASIC12.95□□□□□ -0.34
Clcf1Q9QZM3 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Clcf1Q9QZM3 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Clcf1Q9QZM3 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Clcf1Q9QZM3 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Clcf1Q9QZM3 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Clcf1Q9QZM3 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Clcf1Q9QZM3 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Clcf1Q9QZM3 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Clcf1Q9QZM3 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
Clcf1Q9QZM3 Gm45546-201ENSMUST00000211053 2394 ntBASIC12.95□□□□□ -0.34
Clcf1Q9QZM3 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Clcf1Q9QZM3 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Clcf1Q9QZM3 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Clcf1Q9QZM3 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Clcf1Q9QZM3 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Clcf1Q9QZM3 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Clcf1Q9QZM3 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC12.94□□□□□ -0.34
Clcf1Q9QZM3 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Clcf1Q9QZM3 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC12.94□□□□□ -0.34
Clcf1Q9QZM3 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Clcf1Q9QZM3 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Clcf1Q9QZM3 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Clcf1Q9QZM3 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Clcf1Q9QZM3 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Clcf1Q9QZM3 AC159621.2-201ENSMUST00000223519 1326 ntBASIC12.94□□□□□ -0.34
Clcf1Q9QZM3 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Clcf1Q9QZM3 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Clcf1Q9QZM3 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Clcf1Q9QZM3 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Clcf1Q9QZM3 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Clcf1Q9QZM3 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Clcf1Q9QZM3 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Clcf1Q9QZM3 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Clcf1Q9QZM3 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Clcf1Q9QZM3 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC12.94□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms