Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Ube3bQ9ES34 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ube3bQ9ES34 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Ube3bQ9ES34 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ube3bQ9ES34 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ube3bQ9ES34 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ube3bQ9ES34 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ube3bQ9ES34 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Ube3bQ9ES34 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Ube3bQ9ES34 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ube3bQ9ES34 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Ube3bQ9ES34 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC16.89■□□□□ 0.29
Ube3bQ9ES34 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ube3bQ9ES34 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Ube3bQ9ES34 AC135669.1-201ENSMUST00000213585 412 ntBASIC16.89■□□□□ 0.29
Ube3bQ9ES34 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ube3bQ9ES34 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Ube3bQ9ES34 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Ube3bQ9ES34 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Ube3bQ9ES34 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Ube3bQ9ES34 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC16.89■□□□□ 0.29
Ube3bQ9ES34 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ube3bQ9ES34 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Ube3bQ9ES34 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ube3bQ9ES34 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ube3bQ9ES34 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ube3bQ9ES34 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Ube3bQ9ES34 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ube3bQ9ES34 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ube3bQ9ES34 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ube3bQ9ES34 Gm14452-201ENSMUST00000118680 1632 ntBASIC16.88■□□□□ 0.29
Ube3bQ9ES34 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ube3bQ9ES34 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ube3bQ9ES34 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ube3bQ9ES34 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ube3bQ9ES34 Gm45133-201ENSMUST00000207548 2773 ntBASIC16.88■□□□□ 0.29
Ube3bQ9ES34 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC16.88■□□□□ 0.29
Ube3bQ9ES34 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC16.88■□□□□ 0.29
Ube3bQ9ES34 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ube3bQ9ES34 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Ube3bQ9ES34 Gm6473-201ENSMUST00000188572 1210 ntBASIC16.88■□□□□ 0.29
Ube3bQ9ES34 Gm5425-201ENSMUST00000214125 459 ntBASIC16.88■□□□□ 0.29
Ube3bQ9ES34 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC16.88■□□□□ 0.29
Ube3bQ9ES34 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ube3bQ9ES34 Gm37736-201ENSMUST00000193564 2802 ntBASIC16.88■□□□□ 0.29
Ube3bQ9ES34 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ube3bQ9ES34 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ube3bQ9ES34 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ube3bQ9ES34 AC114543.1-201ENSMUST00000226451 1558 ntBASIC16.88■□□□□ 0.29
Ube3bQ9ES34 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ube3bQ9ES34 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ube3bQ9ES34 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Ube3bQ9ES34 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ube3bQ9ES34 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ube3bQ9ES34 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
Ube3bQ9ES34 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ube3bQ9ES34 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Ube3bQ9ES34 Ldb3-207ENSMUST00000227819 1499 ntBASIC16.87■□□□□ 0.29
Ube3bQ9ES34 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ube3bQ9ES34 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Ube3bQ9ES34 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ube3bQ9ES34 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Ube3bQ9ES34 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC16.87■□□□□ 0.29
Ube3bQ9ES34 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ube3bQ9ES34 Gm12859-201ENSMUST00000117834 427 ntBASIC16.87■□□□□ 0.29
Ube3bQ9ES34 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC16.87■□□□□ 0.29
Ube3bQ9ES34 Gm28760-201ENSMUST00000185995 736 ntBASIC16.87■□□□□ 0.29
Ube3bQ9ES34 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC16.87■□□□□ 0.29
Ube3bQ9ES34 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ube3bQ9ES34 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ube3bQ9ES34 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ube3bQ9ES34 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ube3bQ9ES34 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ube3bQ9ES34 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ube3bQ9ES34 Gm9347-201ENSMUST00000211473 1607 ntBASIC16.87■□□□□ 0.29
Ube3bQ9ES34 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ube3bQ9ES34 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Ube3bQ9ES34 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ube3bQ9ES34 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ube3bQ9ES34 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ube3bQ9ES34 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ube3bQ9ES34 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Ube3bQ9ES34 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ube3bQ9ES34 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ube3bQ9ES34 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ube3bQ9ES34 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ube3bQ9ES34 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Ube3bQ9ES34 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ube3bQ9ES34 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Ube3bQ9ES34 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Ube3bQ9ES34 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Ube3bQ9ES34 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ube3bQ9ES34 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ube3bQ9ES34 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC16.86■□□□□ 0.29
Ube3bQ9ES34 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
Ube3bQ9ES34 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC16.86■□□□□ 0.29
Ube3bQ9ES34 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Ube3bQ9ES34 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
Ube3bQ9ES34 Gm31326-201ENSMUST00000191856 1048 ntBASIC16.86■□□□□ 0.29
Ube3bQ9ES34 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC16.86■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 53.5 ms