Protein–RNA interactions for Protein: Q9ERD7

Tubb3, Tubulin beta-3 chain, mousemouse

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb3Q9ERD7 Gm16026-204ENSMUST00000162652 683 ntBASIC14.16□□□□□ -0.14
Tubb3Q9ERD7 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tubb3Q9ERD7 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC14.16□□□□□ -0.14
Tubb3Q9ERD7 Gm25948-201ENSMUST00000175334 112 ntBASIC14.16□□□□□ -0.14
Tubb3Q9ERD7 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Tubb3Q9ERD7 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC14.16□□□□□ -0.14
Tubb3Q9ERD7 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Tubb3Q9ERD7 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Tubb3Q9ERD7 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC14.16□□□□□ -0.14
Tubb3Q9ERD7 AC148324.1-201ENSMUST00000219034 4240 ntBASIC14.16□□□□□ -0.14
Tubb3Q9ERD7 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tubb3Q9ERD7 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tubb3Q9ERD7 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tubb3Q9ERD7 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tubb3Q9ERD7 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
Tubb3Q9ERD7 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Tubb3Q9ERD7 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tubb3Q9ERD7 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC14.16□□□□□ -0.14
Tubb3Q9ERD7 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Tubb3Q9ERD7 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tubb3Q9ERD7 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
Tubb3Q9ERD7 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tubb3Q9ERD7 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC14.15□□□□□ -0.14
Tubb3Q9ERD7 Fgf17-202ENSMUST00000227123 1336 ntBASIC14.15□□□□□ -0.14
Tubb3Q9ERD7 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tubb3Q9ERD7 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tubb3Q9ERD7 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Tubb3Q9ERD7 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tubb3Q9ERD7 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC14.15□□□□□ -0.14
Tubb3Q9ERD7 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tubb3Q9ERD7 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tubb3Q9ERD7 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tubb3Q9ERD7 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tubb3Q9ERD7 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tubb3Q9ERD7 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tubb3Q9ERD7 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tubb3Q9ERD7 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tubb3Q9ERD7 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tubb3Q9ERD7 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Tubb3Q9ERD7 CT025626.1-201ENSMUST00000223735 1455 ntBASIC14.15□□□□□ -0.14
Tubb3Q9ERD7 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tubb3Q9ERD7 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tubb3Q9ERD7 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC14.15□□□□□ -0.14
Tubb3Q9ERD7 Gm7774-201ENSMUST00000200064 533 ntBASIC14.15□□□□□ -0.14
Tubb3Q9ERD7 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tubb3Q9ERD7 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tubb3Q9ERD7 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Tubb3Q9ERD7 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tubb3Q9ERD7 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Tubb3Q9ERD7 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tubb3Q9ERD7 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tubb3Q9ERD7 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tubb3Q9ERD7 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Tubb3Q9ERD7 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Tubb3Q9ERD7 AC121801.1-201ENSMUST00000225363 1899 ntBASIC14.14□□□□□ -0.15
Tubb3Q9ERD7 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC14.14□□□□□ -0.15
Tubb3Q9ERD7 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Tubb3Q9ERD7 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tubb3Q9ERD7 Mmp14-206ENSMUST00000225641 3238 ntBASIC14.14□□□□□ -0.15
Tubb3Q9ERD7 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Tubb3Q9ERD7 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tubb3Q9ERD7 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Tubb3Q9ERD7 Mir449b-201ENSMUST00000104833 80 ntBASIC14.14□□□□□ -0.15
Tubb3Q9ERD7 Gm11543-201ENSMUST00000120758 370 ntBASIC14.14□□□□□ -0.15
Tubb3Q9ERD7 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Tubb3Q9ERD7 Gm15593-201ENSMUST00000122085 1008 ntBASIC14.14□□□□□ -0.15
Tubb3Q9ERD7 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC14.14□□□□□ -0.15
Tubb3Q9ERD7 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tubb3Q9ERD7 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
Tubb3Q9ERD7 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Tubb3Q9ERD7 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Tubb3Q9ERD7 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Tubb3Q9ERD7 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tubb3Q9ERD7 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Tubb3Q9ERD7 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tubb3Q9ERD7 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tubb3Q9ERD7 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Tubb3Q9ERD7 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tubb3Q9ERD7 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tubb3Q9ERD7 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tubb3Q9ERD7 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC14.14□□□□□ -0.15
Tubb3Q9ERD7 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC14.14□□□□□ -0.15
Tubb3Q9ERD7 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tubb3Q9ERD7 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Tubb3Q9ERD7 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Tubb3Q9ERD7 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Tubb3Q9ERD7 Gm38102-201ENSMUST00000192791 1935 ntBASIC14.13□□□□□ -0.15
Tubb3Q9ERD7 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Tubb3Q9ERD7 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Tubb3Q9ERD7 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC14.13□□□□□ -0.15
Tubb3Q9ERD7 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Tubb3Q9ERD7 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Tubb3Q9ERD7 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Tubb3Q9ERD7 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Tubb3Q9ERD7 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Tubb3Q9ERD7 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
Tubb3Q9ERD7 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Tubb3Q9ERD7 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Tubb3Q9ERD7 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC14.13□□□□□ -0.15
Tubb3Q9ERD7 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms