Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 Gm3786-201ENSMUST00000202659 378 ntBASIC14.53□□□□□ -0.08
Nkx2-4Q9EQM3 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nkx2-4Q9EQM3 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Nkx2-4Q9EQM3 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nkx2-4Q9EQM3 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Nkx2-4Q9EQM3 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nkx2-4Q9EQM3 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nkx2-4Q9EQM3 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nkx2-4Q9EQM3 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC14.53□□□□□ -0.08
Nkx2-4Q9EQM3 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Nkx2-4Q9EQM3 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Nkx2-4Q9EQM3 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nkx2-4Q9EQM3 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
Nkx2-4Q9EQM3 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC14.52□□□□□ -0.08
Nkx2-4Q9EQM3 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Nkx2-4Q9EQM3 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Nkx2-4Q9EQM3 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Nkx2-4Q9EQM3 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Nkx2-4Q9EQM3 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Nkx2-4Q9EQM3 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Nkx2-4Q9EQM3 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC14.52□□□□□ -0.08
Nkx2-4Q9EQM3 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC14.52□□□□□ -0.08
Nkx2-4Q9EQM3 Gm20628-201ENSMUST00000177363 3215 ntBASIC14.52□□□□□ -0.08
Nkx2-4Q9EQM3 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Nkx2-4Q9EQM3 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Nkx2-4Q9EQM3 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Nkx2-4Q9EQM3 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC14.52□□□□□ -0.09
Nkx2-4Q9EQM3 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC14.52□□□□□ -0.09
Nkx2-4Q9EQM3 Gm12485-201ENSMUST00000119641 291 ntBASIC14.52□□□□□ -0.09
Nkx2-4Q9EQM3 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC14.52□□□□□ -0.09
Nkx2-4Q9EQM3 Gm13385-201ENSMUST00000121089 220 ntBASIC14.52□□□□□ -0.09
Nkx2-4Q9EQM3 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Nkx2-4Q9EQM3 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Nkx2-4Q9EQM3 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Nkx2-4Q9EQM3 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC14.52□□□□□ -0.09
Nkx2-4Q9EQM3 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Nkx2-4Q9EQM3 Gm27501-201ENSMUST00000183599 107 ntBASIC14.52□□□□□ -0.09
Nkx2-4Q9EQM3 Gm29199-201ENSMUST00000187766 775 ntBASIC14.52□□□□□ -0.09
Nkx2-4Q9EQM3 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Nkx2-4Q9EQM3 Gm38002-201ENSMUST00000193255 180 ntBASIC14.52□□□□□ -0.09
Nkx2-4Q9EQM3 Gm44397-201ENSMUST00000195950 113 ntBASIC14.52□□□□□ -0.09
Nkx2-4Q9EQM3 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Nkx2-4Q9EQM3 Gm19309-201ENSMUST00000218295 205 ntBASIC14.52□□□□□ -0.09
Nkx2-4Q9EQM3 Gm18027-201ENSMUST00000218947 619 ntBASIC14.52□□□□□ -0.09
Nkx2-4Q9EQM3 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Nkx2-4Q9EQM3 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Nkx2-4Q9EQM3 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Nkx2-4Q9EQM3 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Nkx2-4Q9EQM3 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Nkx2-4Q9EQM3 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Nkx2-4Q9EQM3 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Nkx2-4Q9EQM3 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Nkx2-4Q9EQM3 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Nkx2-4Q9EQM3 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC14.52□□□□□ -0.09
Nkx2-4Q9EQM3 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC14.52□□□□□ -0.09
Nkx2-4Q9EQM3 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Nkx2-4Q9EQM3 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Nkx2-4Q9EQM3 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Nkx2-4Q9EQM3 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Nkx2-4Q9EQM3 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nkx2-4Q9EQM3 Gm10710-201ENSMUST00000047876 3971 ntBASIC14.51□□□□□ -0.09
Nkx2-4Q9EQM3 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nkx2-4Q9EQM3 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nkx2-4Q9EQM3 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nkx2-4Q9EQM3 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Nkx2-4Q9EQM3 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Nkx2-4Q9EQM3 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Nkx2-4Q9EQM3 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC14.51□□□□□ -0.09
Nkx2-4Q9EQM3 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Nkx2-4Q9EQM3 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC14.51□□□□□ -0.09
Nkx2-4Q9EQM3 AC166997.1-201ENSMUST00000225122 572 ntBASIC14.51□□□□□ -0.09
Nkx2-4Q9EQM3 AC093022.1-201ENSMUST00000226949 1072 ntBASIC14.51□□□□□ -0.09
Nkx2-4Q9EQM3 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nkx2-4Q9EQM3 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nkx2-4Q9EQM3 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nkx2-4Q9EQM3 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nkx2-4Q9EQM3 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Nkx2-4Q9EQM3 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Nkx2-4Q9EQM3 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nkx2-4Q9EQM3 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nkx2-4Q9EQM3 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Nkx2-4Q9EQM3 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nkx2-4Q9EQM3 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC14.51□□□□□ -0.09
Nkx2-4Q9EQM3 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nkx2-4Q9EQM3 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nkx2-4Q9EQM3 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nkx2-4Q9EQM3 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nkx2-4Q9EQM3 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nkx2-4Q9EQM3 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nkx2-4Q9EQM3 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nkx2-4Q9EQM3 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nkx2-4Q9EQM3 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nkx2-4Q9EQM3 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Nkx2-4Q9EQM3 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nkx2-4Q9EQM3 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nkx2-4Q9EQM3 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC14.5□□□□□ -0.09
Nkx2-4Q9EQM3 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC14.5□□□□□ -0.09
Nkx2-4Q9EQM3 Gm15808-201ENSMUST00000119046 604 ntBASIC14.5□□□□□ -0.09
Nkx2-4Q9EQM3 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Nkx2-4Q9EQM3 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms