Protein–RNA interactions for Protein: Q9D7F7

Chmp4c, Charged multivesicular body protein 4c, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4cQ9D7F7 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC17.06■□□□□ 0.32
Chmp4cQ9D7F7 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Chmp4cQ9D7F7 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Chmp4cQ9D7F7 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Chmp4cQ9D7F7 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
Chmp4cQ9D7F7 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Chmp4cQ9D7F7 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Chmp4cQ9D7F7 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Chmp4cQ9D7F7 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC17.06■□□□□ 0.32
Chmp4cQ9D7F7 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Chmp4cQ9D7F7 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Chmp4cQ9D7F7 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Chmp4cQ9D7F7 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Chmp4cQ9D7F7 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Chmp4cQ9D7F7 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Chmp4cQ9D7F7 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Chmp4cQ9D7F7 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Chmp4cQ9D7F7 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
Chmp4cQ9D7F7 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Chmp4cQ9D7F7 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC17.05■□□□□ 0.32
Chmp4cQ9D7F7 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Chmp4cQ9D7F7 Gm13233-201ENSMUST00000118760 1443 ntBASIC17.05■□□□□ 0.32
Chmp4cQ9D7F7 Gm13244-201ENSMUST00000118855 1446 ntBASIC17.05■□□□□ 0.32
Chmp4cQ9D7F7 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Chmp4cQ9D7F7 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Chmp4cQ9D7F7 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Chmp4cQ9D7F7 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Chmp4cQ9D7F7 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Chmp4cQ9D7F7 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Chmp4cQ9D7F7 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Chmp4cQ9D7F7 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Chmp4cQ9D7F7 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Chmp4cQ9D7F7 Gm6226-201ENSMUST00000117765 1146 ntBASIC17.05■□□□□ 0.32
Chmp4cQ9D7F7 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC17.05■□□□□ 0.32
Chmp4cQ9D7F7 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Chmp4cQ9D7F7 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Chmp4cQ9D7F7 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Chmp4cQ9D7F7 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Chmp4cQ9D7F7 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Chmp4cQ9D7F7 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Chmp4cQ9D7F7 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Chmp4cQ9D7F7 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Chmp4cQ9D7F7 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Chmp4cQ9D7F7 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Chmp4cQ9D7F7 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC17.05■□□□□ 0.32
Chmp4cQ9D7F7 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Chmp4cQ9D7F7 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Chmp4cQ9D7F7 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Chmp4cQ9D7F7 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Chmp4cQ9D7F7 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Chmp4cQ9D7F7 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC17.04■□□□□ 0.32
Chmp4cQ9D7F7 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Chmp4cQ9D7F7 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Chmp4cQ9D7F7 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Chmp4cQ9D7F7 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Chmp4cQ9D7F7 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Chmp4cQ9D7F7 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Chmp4cQ9D7F7 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Chmp4cQ9D7F7 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Chmp4cQ9D7F7 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Chmp4cQ9D7F7 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Chmp4cQ9D7F7 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Chmp4cQ9D7F7 Gm20553-201ENSMUST00000204205 844 ntBASIC17.04■□□□□ 0.32
Chmp4cQ9D7F7 AW822252-206ENSMUST00000208904 237 ntBASIC17.04■□□□□ 0.32
Chmp4cQ9D7F7 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Chmp4cQ9D7F7 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Chmp4cQ9D7F7 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Chmp4cQ9D7F7 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Chmp4cQ9D7F7 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Chmp4cQ9D7F7 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Chmp4cQ9D7F7 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
Chmp4cQ9D7F7 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Chmp4cQ9D7F7 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Chmp4cQ9D7F7 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Chmp4cQ9D7F7 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC17.04■□□□□ 0.32
Chmp4cQ9D7F7 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Chmp4cQ9D7F7 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Chmp4cQ9D7F7 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Chmp4cQ9D7F7 Gm45630-201ENSMUST00000210243 1911 ntBASIC17.04■□□□□ 0.32
Chmp4cQ9D7F7 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Chmp4cQ9D7F7 Gm9252-201ENSMUST00000172364 1602 ntBASIC17.03■□□□□ 0.32
Chmp4cQ9D7F7 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Chmp4cQ9D7F7 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Chmp4cQ9D7F7 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC17.03■□□□□ 0.32
Chmp4cQ9D7F7 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Chmp4cQ9D7F7 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Chmp4cQ9D7F7 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Chmp4cQ9D7F7 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Chmp4cQ9D7F7 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Chmp4cQ9D7F7 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Chmp4cQ9D7F7 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Chmp4cQ9D7F7 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Chmp4cQ9D7F7 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Chmp4cQ9D7F7 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Chmp4cQ9D7F7 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Chmp4cQ9D7F7 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Chmp4cQ9D7F7 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
Chmp4cQ9D7F7 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Chmp4cQ9D7F7 Gm27525-201ENSMUST00000184465 107 ntBASIC17.03■□□□□ 0.32
Chmp4cQ9D7F7 Gm37230-201ENSMUST00000194491 818 ntBASIC17.03■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 49.7 ms