Protein–RNA interactions for Protein: Q9D3E6

Stag1, Cohesin subunit SA-1, mousemouse

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stag1Q9D3E6 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Stag1Q9D3E6 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Stag1Q9D3E6 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Stag1Q9D3E6 Gm11918-201ENSMUST00000121660 179 ntBASIC16.93■□□□□ 0.3
Stag1Q9D3E6 Gm5354-201ENSMUST00000182417 973 ntBASIC16.93■□□□□ 0.3
Stag1Q9D3E6 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Stag1Q9D3E6 Gm43433-201ENSMUST00000196573 481 ntBASIC16.93■□□□□ 0.3
Stag1Q9D3E6 Ighv8-14-201ENSMUST00000196781 358 ntBASIC16.93■□□□□ 0.3
Stag1Q9D3E6 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC16.93■□□□□ 0.3
Stag1Q9D3E6 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Stag1Q9D3E6 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC16.93■□□□□ 0.3
Stag1Q9D3E6 AC238811.3-201ENSMUST00000225422 709 ntBASIC16.93■□□□□ 0.3
Stag1Q9D3E6 AC155729.1-201ENSMUST00000227758 544 ntBASIC16.93■□□□□ 0.3
Stag1Q9D3E6 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Stag1Q9D3E6 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Stag1Q9D3E6 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Stag1Q9D3E6 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Stag1Q9D3E6 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Stag1Q9D3E6 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Stag1Q9D3E6 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Stag1Q9D3E6 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Stag1Q9D3E6 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Stag1Q9D3E6 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Stag1Q9D3E6 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Stag1Q9D3E6 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Stag1Q9D3E6 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Stag1Q9D3E6 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC16.92■□□□□ 0.3
Stag1Q9D3E6 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Stag1Q9D3E6 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Stag1Q9D3E6 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Stag1Q9D3E6 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC16.92■□□□□ 0.3
Stag1Q9D3E6 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Stag1Q9D3E6 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC16.92■□□□□ 0.3
Stag1Q9D3E6 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Stag1Q9D3E6 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Stag1Q9D3E6 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Stag1Q9D3E6 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Stag1Q9D3E6 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Stag1Q9D3E6 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Stag1Q9D3E6 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Stag1Q9D3E6 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC16.92■□□□□ 0.3
Stag1Q9D3E6 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Stag1Q9D3E6 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Stag1Q9D3E6 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Stag1Q9D3E6 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC16.92■□□□□ 0.3
Stag1Q9D3E6 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Stag1Q9D3E6 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Stag1Q9D3E6 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Stag1Q9D3E6 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Stag1Q9D3E6 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Stag1Q9D3E6 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Stag1Q9D3E6 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Stag1Q9D3E6 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Stag1Q9D3E6 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Stag1Q9D3E6 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Stag1Q9D3E6 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Stag1Q9D3E6 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Stag1Q9D3E6 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Stag1Q9D3E6 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Stag1Q9D3E6 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Stag1Q9D3E6 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Stag1Q9D3E6 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Stag1Q9D3E6 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Stag1Q9D3E6 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Stag1Q9D3E6 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
Stag1Q9D3E6 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC16.91■□□□□ 0.3
Stag1Q9D3E6 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Stag1Q9D3E6 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC16.91■□□□□ 0.3
Stag1Q9D3E6 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC16.91■□□□□ 0.3
Stag1Q9D3E6 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
Stag1Q9D3E6 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Stag1Q9D3E6 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Stag1Q9D3E6 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC16.91■□□□□ 0.3
Stag1Q9D3E6 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Stag1Q9D3E6 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Stag1Q9D3E6 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC16.91■□□□□ 0.3
Stag1Q9D3E6 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Stag1Q9D3E6 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Stag1Q9D3E6 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Stag1Q9D3E6 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Stag1Q9D3E6 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Stag1Q9D3E6 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Stag1Q9D3E6 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Stag1Q9D3E6 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Stag1Q9D3E6 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Stag1Q9D3E6 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Stag1Q9D3E6 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Stag1Q9D3E6 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Stag1Q9D3E6 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Stag1Q9D3E6 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Stag1Q9D3E6 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Stag1Q9D3E6 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Stag1Q9D3E6 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC16.9■□□□□ 0.3
Stag1Q9D3E6 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Stag1Q9D3E6 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Stag1Q9D3E6 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Stag1Q9D3E6 Gm44608-201ENSMUST00000206827 855 ntBASIC16.9■□□□□ 0.3
Stag1Q9D3E6 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Stag1Q9D3E6 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Stag1Q9D3E6 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms