Protein–RNA interactions for Protein: Q9D2N9

Vps33a, Vacuolar protein sorting-associated protein 33A, mousemouse

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps33aQ9D2N9 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC15.1■□□□□ 0.01
Vps33aQ9D2N9 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC15.1■□□□□ 0.01
Vps33aQ9D2N9 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
Vps33aQ9D2N9 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vps33aQ9D2N9 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Vps33aQ9D2N9 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vps33aQ9D2N9 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vps33aQ9D2N9 Gm12020-201ENSMUST00000119030 2042 ntBASIC15.1■□□□□ 0.01
Vps33aQ9D2N9 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vps33aQ9D2N9 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vps33aQ9D2N9 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vps33aQ9D2N9 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Vps33aQ9D2N9 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vps33aQ9D2N9 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vps33aQ9D2N9 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Vps33aQ9D2N9 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Vps33aQ9D2N9 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Vps33aQ9D2N9 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Vps33aQ9D2N9 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Vps33aQ9D2N9 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Vps33aQ9D2N9 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Vps33aQ9D2N9 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Vps33aQ9D2N9 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Vps33aQ9D2N9 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Vps33aQ9D2N9 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC15.09■□□□□ 0.01
Vps33aQ9D2N9 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC15.09■□□□□ 0.01
Vps33aQ9D2N9 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC15.09■□□□□ 0.01
Vps33aQ9D2N9 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC15.09■□□□□ 0.01
Vps33aQ9D2N9 Gm29518-201ENSMUST00000190858 372 ntBASIC15.09■□□□□ 0.01
Vps33aQ9D2N9 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Vps33aQ9D2N9 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Vps33aQ9D2N9 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Vps33aQ9D2N9 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Vps33aQ9D2N9 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Vps33aQ9D2N9 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Vps33aQ9D2N9 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Vps33aQ9D2N9 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Vps33aQ9D2N9 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Vps33aQ9D2N9 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Vps33aQ9D2N9 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Vps33aQ9D2N9 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Vps33aQ9D2N9 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Vps33aQ9D2N9 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Vps33aQ9D2N9 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Vps33aQ9D2N9 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Vps33aQ9D2N9 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Vps33aQ9D2N9 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Vps33aQ9D2N9 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Vps33aQ9D2N9 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Vps33aQ9D2N9 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Vps33aQ9D2N9 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Vps33aQ9D2N9 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC15.08■□□□□ 0.01
Vps33aQ9D2N9 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Vps33aQ9D2N9 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC15.08■□□□□ 0
Vps33aQ9D2N9 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Vps33aQ9D2N9 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC15.08■□□□□ 0
Vps33aQ9D2N9 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Vps33aQ9D2N9 Rprl3-201ENSMUST00000157400 290 ntBASIC15.08■□□□□ 0
Vps33aQ9D2N9 Olfr286-202ENSMUST00000205305 969 ntBASIC15.08■□□□□ 0
Vps33aQ9D2N9 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Vps33aQ9D2N9 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Vps33aQ9D2N9 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Vps33aQ9D2N9 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Vps33aQ9D2N9 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Vps33aQ9D2N9 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Vps33aQ9D2N9 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Vps33aQ9D2N9 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Vps33aQ9D2N9 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC15.08■□□□□ 0
Vps33aQ9D2N9 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Vps33aQ9D2N9 Gm7049-201ENSMUST00000223520 1712 ntBASIC15.08■□□□□ 0
Vps33aQ9D2N9 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
Vps33aQ9D2N9 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Vps33aQ9D2N9 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Vps33aQ9D2N9 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Vps33aQ9D2N9 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Vps33aQ9D2N9 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC15.08■□□□□ 0
Vps33aQ9D2N9 Pck2-205ENSMUST00000226352 2784 ntBASIC15.07■□□□□ 0
Vps33aQ9D2N9 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Vps33aQ9D2N9 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC15.07■□□□□ 0
Vps33aQ9D2N9 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC15.07■□□□□ 0
Vps33aQ9D2N9 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC15.07■□□□□ 0
Vps33aQ9D2N9 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Vps33aQ9D2N9 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Vps33aQ9D2N9 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Vps33aQ9D2N9 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC15.07■□□□□ 0
Vps33aQ9D2N9 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC15.07■□□□□ 0
Vps33aQ9D2N9 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Vps33aQ9D2N9 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Vps33aQ9D2N9 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Vps33aQ9D2N9 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Vps33aQ9D2N9 AA414768-201ENSMUST00000121924 1257 ntBASIC15.07■□□□□ 0
Vps33aQ9D2N9 Gm6659-201ENSMUST00000174752 547 ntBASIC15.07■□□□□ 0
Vps33aQ9D2N9 Gm23634-201ENSMUST00000175071 91 ntBASIC15.07■□□□□ 0
Vps33aQ9D2N9 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Vps33aQ9D2N9 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Vps33aQ9D2N9 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC15.07■□□□□ 0
Vps33aQ9D2N9 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Vps33aQ9D2N9 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Vps33aQ9D2N9 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Vps33aQ9D2N9 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms