Protein–RNA interactions for Protein: Q9D1C8

Vps28, Vacuolar protein sorting-associated protein 28 homolog, mousemouse

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps28Q9D1C8 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Vps28Q9D1C8 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Vps28Q9D1C8 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Vps28Q9D1C8 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC14.61□□□□□ -0.07
Vps28Q9D1C8 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Vps28Q9D1C8 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Vps28Q9D1C8 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
Vps28Q9D1C8 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Vps28Q9D1C8 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Vps28Q9D1C8 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC14.61□□□□□ -0.07
Vps28Q9D1C8 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
Vps28Q9D1C8 Gm14042-201ENSMUST00000120139 833 ntBASIC14.61□□□□□ -0.07
Vps28Q9D1C8 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Vps28Q9D1C8 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC14.61□□□□□ -0.07
Vps28Q9D1C8 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC14.61□□□□□ -0.07
Vps28Q9D1C8 Gm27631-201ENSMUST00000184163 466 ntBASIC14.61□□□□□ -0.07
Vps28Q9D1C8 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Vps28Q9D1C8 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Vps28Q9D1C8 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Vps28Q9D1C8 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC14.61□□□□□ -0.07
Vps28Q9D1C8 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Vps28Q9D1C8 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Vps28Q9D1C8 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC14.61□□□□□ -0.07
Vps28Q9D1C8 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Vps28Q9D1C8 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Vps28Q9D1C8 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Vps28Q9D1C8 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Vps28Q9D1C8 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Vps28Q9D1C8 Gm9856-201ENSMUST00000217077 2578 ntBASIC14.61□□□□□ -0.07
Vps28Q9D1C8 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Vps28Q9D1C8 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Vps28Q9D1C8 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Vps28Q9D1C8 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Vps28Q9D1C8 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Vps28Q9D1C8 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Vps28Q9D1C8 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Vps28Q9D1C8 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Vps28Q9D1C8 Nupl1-207ENSMUST00000225311 2475 ntBASIC14.6□□□□□ -0.07
Vps28Q9D1C8 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Vps28Q9D1C8 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Vps28Q9D1C8 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Vps28Q9D1C8 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Vps28Q9D1C8 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Vps28Q9D1C8 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Vps28Q9D1C8 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC14.6□□□□□ -0.07
Vps28Q9D1C8 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Vps28Q9D1C8 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Vps28Q9D1C8 Gm14767-201ENSMUST00000121559 586 ntBASIC14.6□□□□□ -0.07
Vps28Q9D1C8 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Vps28Q9D1C8 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Vps28Q9D1C8 Gm45453-201ENSMUST00000211758 853 ntBASIC14.6□□□□□ -0.07
Vps28Q9D1C8 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC14.6□□□□□ -0.07
Vps28Q9D1C8 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Vps28Q9D1C8 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Vps28Q9D1C8 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Vps28Q9D1C8 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Vps28Q9D1C8 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC14.6□□□□□ -0.07
Vps28Q9D1C8 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC14.6□□□□□ -0.07
Vps28Q9D1C8 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Vps28Q9D1C8 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Vps28Q9D1C8 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Vps28Q9D1C8 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Vps28Q9D1C8 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Vps28Q9D1C8 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Vps28Q9D1C8 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Vps28Q9D1C8 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Vps28Q9D1C8 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Vps28Q9D1C8 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Vps28Q9D1C8 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Vps28Q9D1C8 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC14.6□□□□□ -0.07
Vps28Q9D1C8 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Vps28Q9D1C8 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Vps28Q9D1C8 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC14.59□□□□□ -0.07
Vps28Q9D1C8 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Vps28Q9D1C8 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Vps28Q9D1C8 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Vps28Q9D1C8 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Vps28Q9D1C8 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Vps28Q9D1C8 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Vps28Q9D1C8 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Vps28Q9D1C8 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Vps28Q9D1C8 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Vps28Q9D1C8 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Vps28Q9D1C8 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Vps28Q9D1C8 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC14.59□□□□□ -0.07
Vps28Q9D1C8 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Vps28Q9D1C8 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Vps28Q9D1C8 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Vps28Q9D1C8 Gm10275-202ENSMUST00000168697 495 ntBASIC14.59□□□□□ -0.07
Vps28Q9D1C8 AC123645.1-201ENSMUST00000228469 605 ntBASIC14.59□□□□□ -0.07
Vps28Q9D1C8 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Vps28Q9D1C8 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Vps28Q9D1C8 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Vps28Q9D1C8 Gm10275-201ENSMUST00000092620 635 ntBASIC14.59□□□□□ -0.07
Vps28Q9D1C8 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Vps28Q9D1C8 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC14.59□□□□□ -0.07
Vps28Q9D1C8 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Vps28Q9D1C8 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Vps28Q9D1C8 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Vps28Q9D1C8 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms