Protein–RNA interactions for Protein: Q9CY50

Ssr1, Translocon-associated protein subunit alpha, mousemouse

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1Q9CY50 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ssr1Q9CY50 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Ssr1Q9CY50 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ssr1Q9CY50 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ssr1Q9CY50 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ssr1Q9CY50 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ssr1Q9CY50 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ssr1Q9CY50 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Ssr1Q9CY50 Mmp14-206ENSMUST00000225641 3238 ntBASIC15.49■□□□□ 0.07
Ssr1Q9CY50 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC15.49■□□□□ 0.07
Ssr1Q9CY50 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
Ssr1Q9CY50 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC15.49■□□□□ 0.07
Ssr1Q9CY50 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC15.49■□□□□ 0.07
Ssr1Q9CY50 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ssr1Q9CY50 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ssr1Q9CY50 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ssr1Q9CY50 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ssr1Q9CY50 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ssr1Q9CY50 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ssr1Q9CY50 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Ssr1Q9CY50 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
Ssr1Q9CY50 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC15.49■□□□□ 0.07
Ssr1Q9CY50 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ssr1Q9CY50 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ssr1Q9CY50 AC084391.1-201ENSMUST00000200651 141 ntBASIC15.49■□□□□ 0.07
Ssr1Q9CY50 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC15.49■□□□□ 0.07
Ssr1Q9CY50 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC15.49■□□□□ 0.07
Ssr1Q9CY50 AC154222.1-201ENSMUST00000223882 475 ntBASIC15.49■□□□□ 0.07
Ssr1Q9CY50 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ssr1Q9CY50 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ssr1Q9CY50 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ssr1Q9CY50 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ssr1Q9CY50 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC15.49■□□□□ 0.07
Ssr1Q9CY50 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC15.49■□□□□ 0.07
Ssr1Q9CY50 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Ssr1Q9CY50 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ssr1Q9CY50 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ssr1Q9CY50 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ssr1Q9CY50 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ssr1Q9CY50 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ssr1Q9CY50 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ssr1Q9CY50 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ssr1Q9CY50 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC15.49■□□□□ 0.07
Ssr1Q9CY50 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ssr1Q9CY50 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ssr1Q9CY50 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ssr1Q9CY50 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ssr1Q9CY50 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC15.48■□□□□ 0.07
Ssr1Q9CY50 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ssr1Q9CY50 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ssr1Q9CY50 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ssr1Q9CY50 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ssr1Q9CY50 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ssr1Q9CY50 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Ssr1Q9CY50 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ssr1Q9CY50 AC164565.1-201ENSMUST00000217520 1484 ntBASIC15.48■□□□□ 0.07
Ssr1Q9CY50 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ssr1Q9CY50 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Ssr1Q9CY50 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ssr1Q9CY50 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC15.48■□□□□ 0.07
Ssr1Q9CY50 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
Ssr1Q9CY50 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Ssr1Q9CY50 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Ssr1Q9CY50 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ssr1Q9CY50 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ssr1Q9CY50 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ssr1Q9CY50 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC15.48■□□□□ 0.07
Ssr1Q9CY50 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Ssr1Q9CY50 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC15.48■□□□□ 0.07
Ssr1Q9CY50 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC15.48■□□□□ 0.07
Ssr1Q9CY50 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC15.48■□□□□ 0.07
Ssr1Q9CY50 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC15.48■□□□□ 0.07
Ssr1Q9CY50 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
Ssr1Q9CY50 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ssr1Q9CY50 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ssr1Q9CY50 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ssr1Q9CY50 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ssr1Q9CY50 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ssr1Q9CY50 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ssr1Q9CY50 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC15.48■□□□□ 0.07
Ssr1Q9CY50 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ssr1Q9CY50 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ssr1Q9CY50 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ssr1Q9CY50 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Ssr1Q9CY50 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Ssr1Q9CY50 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ssr1Q9CY50 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ssr1Q9CY50 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ssr1Q9CY50 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ssr1Q9CY50 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Ssr1Q9CY50 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ssr1Q9CY50 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ssr1Q9CY50 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ssr1Q9CY50 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC15.47■□□□□ 0.07
Ssr1Q9CY50 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC15.47■□□□□ 0.07
Ssr1Q9CY50 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Ssr1Q9CY50 Gm18733-201ENSMUST00000173950 856 ntBASIC15.47■□□□□ 0.07
Ssr1Q9CY50 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Ssr1Q9CY50 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Ssr1Q9CY50 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC15.47■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms