Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim33Q99PP7 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trim33Q99PP7 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim33Q99PP7 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim33Q99PP7 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim33Q99PP7 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim33Q99PP7 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim33Q99PP7 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim33Q99PP7 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim33Q99PP7 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Trim33Q99PP7 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim33Q99PP7 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC14.16□□□□□ -0.14
Trim33Q99PP7 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim33Q99PP7 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Trim33Q99PP7 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Trim33Q99PP7 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC14.16□□□□□ -0.14
Trim33Q99PP7 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim33Q99PP7 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim33Q99PP7 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC14.16□□□□□ -0.14
Trim33Q99PP7 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC14.16□□□□□ -0.14
Trim33Q99PP7 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trim33Q99PP7 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC14.16□□□□□ -0.14
Trim33Q99PP7 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC14.16□□□□□ -0.14
Trim33Q99PP7 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
Trim33Q99PP7 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim33Q99PP7 Gm5867-201ENSMUST00000063197 592 ntBASIC14.16□□□□□ -0.14
Trim33Q99PP7 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trim33Q99PP7 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim33Q99PP7 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trim33Q99PP7 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Trim33Q99PP7 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim33Q99PP7 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim33Q99PP7 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim33Q99PP7 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim33Q99PP7 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Trim33Q99PP7 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
Trim33Q99PP7 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim33Q99PP7 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim33Q99PP7 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim33Q99PP7 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim33Q99PP7 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC14.15□□□□□ -0.14
Trim33Q99PP7 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trim33Q99PP7 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Trim33Q99PP7 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim33Q99PP7 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim33Q99PP7 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trim33Q99PP7 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim33Q99PP7 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim33Q99PP7 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Trim33Q99PP7 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim33Q99PP7 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trim33Q99PP7 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim33Q99PP7 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trim33Q99PP7 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim33Q99PP7 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trim33Q99PP7 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trim33Q99PP7 Gm12620-201ENSMUST00000119791 1986 ntBASIC14.15□□□□□ -0.14
Trim33Q99PP7 Gm12612-201ENSMUST00000140182 1986 ntBASIC14.15□□□□□ -0.14
Trim33Q99PP7 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Trim33Q99PP7 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim33Q99PP7 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Trim33Q99PP7 Zcwpw2-202ENSMUST00000187329 1469 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trim33Q99PP7 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim33Q99PP7 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Trim33Q99PP7 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim33Q99PP7 Gm25287-201ENSMUST00000103846 110 ntBASIC14.15□□□□□ -0.14
Trim33Q99PP7 Gm22918-201ENSMUST00000103855 110 ntBASIC14.15□□□□□ -0.14
Trim33Q99PP7 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trim33Q99PP7 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
Trim33Q99PP7 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC14.15□□□□□ -0.14
Trim33Q99PP7 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC14.15□□□□□ -0.14
Trim33Q99PP7 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC14.15□□□□□ -0.14
Trim33Q99PP7 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trim33Q99PP7 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC14.15□□□□□ -0.14
Trim33Q99PP7 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim33Q99PP7 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim33Q99PP7 Gm6756-201ENSMUST00000180647 1620 ntBASIC14.15□□□□□ -0.14
Trim33Q99PP7 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim33Q99PP7 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Trim33Q99PP7 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.15
Trim33Q99PP7 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trim33Q99PP7 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trim33Q99PP7 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
Trim33Q99PP7 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim33Q99PP7 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Trim33Q99PP7 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim33Q99PP7 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim33Q99PP7 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim33Q99PP7 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trim33Q99PP7 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC14.14□□□□□ -0.15
Trim33Q99PP7 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trim33Q99PP7 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Trim33Q99PP7 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC14.14□□□□□ -0.15
Trim33Q99PP7 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC14.14□□□□□ -0.15
Trim33Q99PP7 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trim33Q99PP7 Ighv8-7-201ENSMUST00000194349 297 ntBASIC14.14□□□□□ -0.15
Trim33Q99PP7 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC14.14□□□□□ -0.15
Trim33Q99PP7 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trim33Q99PP7 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim33Q99PP7 Gm8396-201ENSMUST00000057361 823 ntBASIC14.14□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 72 ms