Protein–RNA interactions for Protein: Q99P47

Cntnap4, Contactin-associated protein-like 4, mousemouse

Predictions only

Length 1,310 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntnap4Q99P47 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cntnap4Q99P47 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Cntnap4Q99P47 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Cntnap4Q99P47 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cntnap4Q99P47 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cntnap4Q99P47 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cntnap4Q99P47 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cntnap4Q99P47 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Cntnap4Q99P47 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Cntnap4Q99P47 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC15.26■□□□□ 0.03
Cntnap4Q99P47 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cntnap4Q99P47 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cntnap4Q99P47 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC15.25■□□□□ 0.03
Cntnap4Q99P47 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cntnap4Q99P47 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Cntnap4Q99P47 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cntnap4Q99P47 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC15.25■□□□□ 0.03
Cntnap4Q99P47 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cntnap4Q99P47 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cntnap4Q99P47 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cntnap4Q99P47 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cntnap4Q99P47 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Cntnap4Q99P47 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cntnap4Q99P47 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cntnap4Q99P47 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Cntnap4Q99P47 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cntnap4Q99P47 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Cntnap4Q99P47 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cntnap4Q99P47 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cntnap4Q99P47 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cntnap4Q99P47 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Cntnap4Q99P47 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Cntnap4Q99P47 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cntnap4Q99P47 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Cntnap4Q99P47 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cntnap4Q99P47 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cntnap4Q99P47 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cntnap4Q99P47 Gm43697-201ENSMUST00000199637 2581 ntBASIC15.25■□□□□ 0.03
Cntnap4Q99P47 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cntnap4Q99P47 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Cntnap4Q99P47 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cntnap4Q99P47 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cntnap4Q99P47 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cntnap4Q99P47 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cntnap4Q99P47 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Cntnap4Q99P47 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
Cntnap4Q99P47 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Cntnap4Q99P47 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Cntnap4Q99P47 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cntnap4Q99P47 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC15.24■□□□□ 0.03
Cntnap4Q99P47 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cntnap4Q99P47 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cntnap4Q99P47 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Cntnap4Q99P47 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cntnap4Q99P47 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cntnap4Q99P47 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cntnap4Q99P47 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cntnap4Q99P47 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Cntnap4Q99P47 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Cntnap4Q99P47 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC15.24■□□□□ 0.03
Cntnap4Q99P47 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cntnap4Q99P47 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Cntnap4Q99P47 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Cntnap4Q99P47 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC15.24■□□□□ 0.03
Cntnap4Q99P47 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cntnap4Q99P47 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Cntnap4Q99P47 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
Cntnap4Q99P47 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cntnap4Q99P47 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cntnap4Q99P47 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC15.24■□□□□ 0.03
Cntnap4Q99P47 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Cntnap4Q99P47 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cntnap4Q99P47 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cntnap4Q99P47 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Cntnap4Q99P47 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cntnap4Q99P47 Gm37912-201ENSMUST00000191895 3076 ntBASIC15.24■□□□□ 0.03
Cntnap4Q99P47 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cntnap4Q99P47 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cntnap4Q99P47 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cntnap4Q99P47 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Cntnap4Q99P47 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cntnap4Q99P47 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cntnap4Q99P47 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cntnap4Q99P47 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cntnap4Q99P47 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Cntnap4Q99P47 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
Cntnap4Q99P47 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cntnap4Q99P47 Gm12882-201ENSMUST00000121696 517 ntBASIC15.23■□□□□ 0.03
Cntnap4Q99P47 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cntnap4Q99P47 Gm33320-201ENSMUST00000192232 530 ntBASIC15.23■□□□□ 0.03
Cntnap4Q99P47 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Cntnap4Q99P47 Gm6266-201ENSMUST00000203844 806 ntBASIC15.23■□□□□ 0.03
Cntnap4Q99P47 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Cntnap4Q99P47 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cntnap4Q99P47 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Cntnap4Q99P47 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC15.23■□□□□ 0.03
Cntnap4Q99P47 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cntnap4Q99P47 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cntnap4Q99P47 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Cntnap4Q99P47 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms