Protein–RNA interactions for Protein: Q99MQ5

Col25a1, Collagen alpha-1(XXV) chain, mousemouse

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col25a1Q99MQ5 Gm21901-201ENSMUST00000189568 696 ntBASIC14.72□□□□□ -0.05
Col25a1Q99MQ5 Gm29424-201ENSMUST00000189716 696 ntBASIC14.72□□□□□ -0.05
Col25a1Q99MQ5 Gm28599-201ENSMUST00000189838 694 ntBASIC14.72□□□□□ -0.05
Col25a1Q99MQ5 Gm21867-201ENSMUST00000189917 696 ntBASIC14.72□□□□□ -0.05
Col25a1Q99MQ5 Gm29269-201ENSMUST00000190087 696 ntBASIC14.72□□□□□ -0.05
Col25a1Q99MQ5 Gm21722-201ENSMUST00000190153 696 ntBASIC14.72□□□□□ -0.05
Col25a1Q99MQ5 Gm28423-201ENSMUST00000190701 696 ntBASIC14.72□□□□□ -0.05
Col25a1Q99MQ5 Gm21899-201ENSMUST00000190745 696 ntBASIC14.72□□□□□ -0.05
Col25a1Q99MQ5 Gm21910-201ENSMUST00000191163 696 ntBASIC14.72□□□□□ -0.05
Col25a1Q99MQ5 Gm21849-201ENSMUST00000191571 696 ntBASIC14.72□□□□□ -0.05
Col25a1Q99MQ5 Gm28678-201ENSMUST00000191593 696 ntBASIC14.72□□□□□ -0.05
Col25a1Q99MQ5 Gm20910-201ENSMUST00000193268 696 ntBASIC14.72□□□□□ -0.05
Col25a1Q99MQ5 Ighv1-62-201ENSMUST00000193406 350 ntBASIC14.72□□□□□ -0.05
Col25a1Q99MQ5 Gm21871-201ENSMUST00000194621 696 ntBASIC14.72□□□□□ -0.05
Col25a1Q99MQ5 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC14.72□□□□□ -0.05
Col25a1Q99MQ5 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
Col25a1Q99MQ5 AC149588.3-201ENSMUST00000227515 150 ntBASIC14.72□□□□□ -0.05
Col25a1Q99MQ5 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col25a1Q99MQ5 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Col25a1Q99MQ5 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Col25a1Q99MQ5 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col25a1Q99MQ5 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col25a1Q99MQ5 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col25a1Q99MQ5 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col25a1Q99MQ5 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col25a1Q99MQ5 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Col25a1Q99MQ5 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col25a1Q99MQ5 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col25a1Q99MQ5 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Col25a1Q99MQ5 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Col25a1Q99MQ5 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Col25a1Q99MQ5 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Col25a1Q99MQ5 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Col25a1Q99MQ5 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Col25a1Q99MQ5 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Col25a1Q99MQ5 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Col25a1Q99MQ5 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Col25a1Q99MQ5 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC14.71□□□□□ -0.05
Col25a1Q99MQ5 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Col25a1Q99MQ5 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC14.71□□□□□ -0.05
Col25a1Q99MQ5 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Col25a1Q99MQ5 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Col25a1Q99MQ5 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Col25a1Q99MQ5 Selenot-ps-201ENSMUST00000119098 593 ntBASIC14.71□□□□□ -0.05
Col25a1Q99MQ5 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC14.71□□□□□ -0.05
Col25a1Q99MQ5 Gm28760-202ENSMUST00000190376 481 ntTSL 5 BASIC14.71□□□□□ -0.05
Col25a1Q99MQ5 Gm7118-201ENSMUST00000200167 1003 ntBASIC14.71□□□□□ -0.05
Col25a1Q99MQ5 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Col25a1Q99MQ5 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Col25a1Q99MQ5 AC125117.1-201ENSMUST00000228121 468 ntBASIC14.71□□□□□ -0.05
Col25a1Q99MQ5 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Col25a1Q99MQ5 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Col25a1Q99MQ5 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Col25a1Q99MQ5 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Col25a1Q99MQ5 Gm44207-201ENSMUST00000204568 1424 ntBASIC14.71□□□□□ -0.05
Col25a1Q99MQ5 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Col25a1Q99MQ5 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC14.71□□□□□ -0.05
Col25a1Q99MQ5 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Col25a1Q99MQ5 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Col25a1Q99MQ5 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.06
Col25a1Q99MQ5 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Col25a1Q99MQ5 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Col25a1Q99MQ5 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Col25a1Q99MQ5 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Col25a1Q99MQ5 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Col25a1Q99MQ5 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Col25a1Q99MQ5 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Col25a1Q99MQ5 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Col25a1Q99MQ5 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Col25a1Q99MQ5 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC14.7□□□□□ -0.06
Col25a1Q99MQ5 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Col25a1Q99MQ5 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Col25a1Q99MQ5 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
Col25a1Q99MQ5 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Col25a1Q99MQ5 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Col25a1Q99MQ5 Gng12-205ENSMUST00000114226 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Col25a1Q99MQ5 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC14.7□□□□□ -0.06
Col25a1Q99MQ5 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC14.7□□□□□ -0.06
Col25a1Q99MQ5 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Col25a1Q99MQ5 Gm27320-201ENSMUST00000184892 109 ntBASIC14.7□□□□□ -0.06
Col25a1Q99MQ5 Gm38139-201ENSMUST00000195806 704 ntTSL 2 BASIC14.7□□□□□ -0.06
Col25a1Q99MQ5 Abhd11os-203ENSMUST00000222613 363 ntBASIC14.7□□□□□ -0.06
Col25a1Q99MQ5 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Col25a1Q99MQ5 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Col25a1Q99MQ5 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Col25a1Q99MQ5 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Col25a1Q99MQ5 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Col25a1Q99MQ5 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Col25a1Q99MQ5 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Col25a1Q99MQ5 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC14.7□□□□□ -0.06
Col25a1Q99MQ5 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Col25a1Q99MQ5 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Col25a1Q99MQ5 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Col25a1Q99MQ5 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Col25a1Q99MQ5 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Col25a1Q99MQ5 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Col25a1Q99MQ5 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Col25a1Q99MQ5 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC14.69□□□□□ -0.06
Col25a1Q99MQ5 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Col25a1Q99MQ5 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC14.69□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms