Protein–RNA interactions for Protein: Q99LE3

Lysmd3, LysM and putative peptidoglycan-binding domain-containing protein 3, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd3Q99LE3 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Lysmd3Q99LE3 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Lysmd3Q99LE3 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Lysmd3Q99LE3 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Lysmd3Q99LE3 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Lysmd3Q99LE3 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Lysmd3Q99LE3 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Lysmd3Q99LE3 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Lysmd3Q99LE3 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Lysmd3Q99LE3 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Lysmd3Q99LE3 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Lysmd3Q99LE3 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Lysmd3Q99LE3 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Lysmd3Q99LE3 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC14.79□□□□□ -0.04
Lysmd3Q99LE3 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
Lysmd3Q99LE3 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Lysmd3Q99LE3 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Lysmd3Q99LE3 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Lysmd3Q99LE3 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Lysmd3Q99LE3 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Lysmd3Q99LE3 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Lysmd3Q99LE3 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Lysmd3Q99LE3 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Lysmd3Q99LE3 Gm27437-201ENSMUST00000183429 107 ntBASIC14.79□□□□□ -0.04
Lysmd3Q99LE3 Gm4081-201ENSMUST00000195287 1838 ntBASIC14.79□□□□□ -0.04
Lysmd3Q99LE3 Gm6916-202ENSMUST00000205523 195 ntBASIC14.79□□□□□ -0.04
Lysmd3Q99LE3 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC14.79□□□□□ -0.04
Lysmd3Q99LE3 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Lysmd3Q99LE3 AC132863.2-201ENSMUST00000226643 799 ntBASIC14.79□□□□□ -0.04
Lysmd3Q99LE3 AC156016.3-201ENSMUST00000228623 344 ntBASIC14.79□□□□□ -0.04
Lysmd3Q99LE3 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Lysmd3Q99LE3 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Lysmd3Q99LE3 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC14.79□□□□□ -0.04
Lysmd3Q99LE3 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Lysmd3Q99LE3 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Lysmd3Q99LE3 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Lysmd3Q99LE3 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Lysmd3Q99LE3 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Lysmd3Q99LE3 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Lysmd3Q99LE3 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Lysmd3Q99LE3 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Lysmd3Q99LE3 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Lysmd3Q99LE3 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Lysmd3Q99LE3 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Lysmd3Q99LE3 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Lysmd3Q99LE3 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
Lysmd3Q99LE3 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Lysmd3Q99LE3 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Lysmd3Q99LE3 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC14.78□□□□□ -0.04
Lysmd3Q99LE3 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Lysmd3Q99LE3 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC14.78□□□□□ -0.04
Lysmd3Q99LE3 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Lysmd3Q99LE3 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC14.78□□□□□ -0.04
Lysmd3Q99LE3 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC14.78□□□□□ -0.04
Lysmd3Q99LE3 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Lysmd3Q99LE3 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Lysmd3Q99LE3 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Lysmd3Q99LE3 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC14.78□□□□□ -0.04
Lysmd3Q99LE3 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC14.78□□□□□ -0.04
Lysmd3Q99LE3 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Lysmd3Q99LE3 Gm27838-201ENSMUST00000184829 128 ntBASIC14.78□□□□□ -0.04
Lysmd3Q99LE3 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC14.78□□□□□ -0.04
Lysmd3Q99LE3 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC14.78□□□□□ -0.04
Lysmd3Q99LE3 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Lysmd3Q99LE3 AC238811.1-201ENSMUST00000225302 441 ntBASIC14.78□□□□□ -0.04
Lysmd3Q99LE3 CT025535.1-201ENSMUST00000227172 491 ntBASIC14.78□□□□□ -0.04
Lysmd3Q99LE3 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Lysmd3Q99LE3 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Lysmd3Q99LE3 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
Lysmd3Q99LE3 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Lysmd3Q99LE3 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Lysmd3Q99LE3 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Lysmd3Q99LE3 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Lysmd3Q99LE3 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Lysmd3Q99LE3 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Lysmd3Q99LE3 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
Lysmd3Q99LE3 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC14.78□□□□□ -0.04
Lysmd3Q99LE3 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Lysmd3Q99LE3 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Lysmd3Q99LE3 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Lysmd3Q99LE3 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Lysmd3Q99LE3 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC14.77□□□□□ -0.04
Lysmd3Q99LE3 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Lysmd3Q99LE3 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Lysmd3Q99LE3 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Lysmd3Q99LE3 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC14.77□□□□□ -0.04
Lysmd3Q99LE3 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Lysmd3Q99LE3 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Lysmd3Q99LE3 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC14.77□□□□□ -0.04
Lysmd3Q99LE3 Gm13127-201ENSMUST00000118978 1389 ntBASIC14.77□□□□□ -0.04
Lysmd3Q99LE3 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Lysmd3Q99LE3 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Lysmd3Q99LE3 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Lysmd3Q99LE3 Gm45667-201ENSMUST00000210380 1316 ntBASIC14.77□□□□□ -0.04
Lysmd3Q99LE3 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Lysmd3Q99LE3 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Lysmd3Q99LE3 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Lysmd3Q99LE3 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Lysmd3Q99LE3 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Lysmd3Q99LE3 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms