Protein–RNA interactions for Protein: Q99JR8

Smarcd2, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2, mousemouse

Known RBP Predictions only

Length 531 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd2Q99JR8 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smarcd2Q99JR8 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smarcd2Q99JR8 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC14.34□□□□□ -0.11
Smarcd2Q99JR8 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Smarcd2Q99JR8 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smarcd2Q99JR8 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Smarcd2Q99JR8 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smarcd2Q99JR8 Mir1982-201ENSMUST00000157368 74 ntBASIC14.34□□□□□ -0.11
Smarcd2Q99JR8 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smarcd2Q99JR8 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smarcd2Q99JR8 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Smarcd2Q99JR8 Gm27839-201ENSMUST00000184242 106 ntBASIC14.34□□□□□ -0.11
Smarcd2Q99JR8 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Smarcd2Q99JR8 Gm19078-201ENSMUST00000206311 727 ntBASIC14.34□□□□□ -0.11
Smarcd2Q99JR8 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Smarcd2Q99JR8 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC14.34□□□□□ -0.11
Smarcd2Q99JR8 AC155729.1-201ENSMUST00000227758 544 ntBASIC14.34□□□□□ -0.11
Smarcd2Q99JR8 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smarcd2Q99JR8 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Smarcd2Q99JR8 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smarcd2Q99JR8 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smarcd2Q99JR8 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Smarcd2Q99JR8 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smarcd2Q99JR8 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smarcd2Q99JR8 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Smarcd2Q99JR8 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
Smarcd2Q99JR8 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smarcd2Q99JR8 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smarcd2Q99JR8 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smarcd2Q99JR8 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smarcd2Q99JR8 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smarcd2Q99JR8 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smarcd2Q99JR8 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Smarcd2Q99JR8 CT010478.1-201ENSMUST00000220747 2787 ntBASIC14.34□□□□□ -0.11
Smarcd2Q99JR8 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Smarcd2Q99JR8 Gm9109-201ENSMUST00000120254 1405 ntBASIC14.33□□□□□ -0.11
Smarcd2Q99JR8 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC14.33□□□□□ -0.11
Smarcd2Q99JR8 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
Smarcd2Q99JR8 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Smarcd2Q99JR8 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Smarcd2Q99JR8 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
Smarcd2Q99JR8 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Smarcd2Q99JR8 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Smarcd2Q99JR8 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Smarcd2Q99JR8 Gm43094-201ENSMUST00000196549 921 ntBASIC14.33□□□□□ -0.12
Smarcd2Q99JR8 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Smarcd2Q99JR8 AC125117.1-201ENSMUST00000228121 468 ntBASIC14.33□□□□□ -0.12
Smarcd2Q99JR8 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Smarcd2Q99JR8 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Smarcd2Q99JR8 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Smarcd2Q99JR8 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Smarcd2Q99JR8 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Smarcd2Q99JR8 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Smarcd2Q99JR8 Gm38037-201ENSMUST00000192600 1624 ntBASIC14.33□□□□□ -0.12
Smarcd2Q99JR8 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Smarcd2Q99JR8 Gm5912-201ENSMUST00000122282 1438 ntBASIC14.32□□□□□ -0.12
Smarcd2Q99JR8 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smarcd2Q99JR8 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smarcd2Q99JR8 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
Smarcd2Q99JR8 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smarcd2Q99JR8 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smarcd2Q99JR8 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Smarcd2Q99JR8 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Smarcd2Q99JR8 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smarcd2Q99JR8 AC114543.1-201ENSMUST00000226451 1558 ntBASIC14.32□□□□□ -0.12
Smarcd2Q99JR8 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smarcd2Q99JR8 Gm12390-201ENSMUST00000117897 397 ntBASIC14.32□□□□□ -0.12
Smarcd2Q99JR8 Gm11524-201ENSMUST00000119349 807 ntBASIC14.32□□□□□ -0.12
Smarcd2Q99JR8 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC14.32□□□□□ -0.12
Smarcd2Q99JR8 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Smarcd2Q99JR8 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Smarcd2Q99JR8 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Smarcd2Q99JR8 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC14.32□□□□□ -0.12
Smarcd2Q99JR8 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC14.32□□□□□ -0.12
Smarcd2Q99JR8 Gm2495-201ENSMUST00000191160 466 ntBASIC14.32□□□□□ -0.12
Smarcd2Q99JR8 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Smarcd2Q99JR8 Gm7067-201ENSMUST00000207698 1249 ntBASIC14.32□□□□□ -0.12
Smarcd2Q99JR8 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC14.32□□□□□ -0.12
Smarcd2Q99JR8 AC166349.1-201ENSMUST00000220866 695 ntBASIC14.32□□□□□ -0.12
Smarcd2Q99JR8 AC110817.1-201ENSMUST00000225706 605 ntBASIC14.32□□□□□ -0.12
Smarcd2Q99JR8 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smarcd2Q99JR8 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smarcd2Q99JR8 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smarcd2Q99JR8 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smarcd2Q99JR8 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smarcd2Q99JR8 Gm44443-201ENSMUST00000204396 5633 ntBASIC14.32□□□□□ -0.12
Smarcd2Q99JR8 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smarcd2Q99JR8 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smarcd2Q99JR8 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Smarcd2Q99JR8 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smarcd2Q99JR8 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Smarcd2Q99JR8 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smarcd2Q99JR8 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Smarcd2Q99JR8 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smarcd2Q99JR8 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Smarcd2Q99JR8 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Smarcd2Q99JR8 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Smarcd2Q99JR8 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smarcd2Q99JR8 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smarcd2Q99JR8 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms