Protein–RNA interactions for Protein: Q99J62

Rfc4, Replication factor C subunit 4, mousemouse

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc4Q99J62 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rfc4Q99J62 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rfc4Q99J62 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rfc4Q99J62 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Rfc4Q99J62 Gm38319-201ENSMUST00000194537 1266 ntBASIC16.37■□□□□ 0.21
Rfc4Q99J62 Gm45841-201ENSMUST00000207700 164 ntBASIC16.37■□□□□ 0.21
Rfc4Q99J62 AC155258.1-201ENSMUST00000219303 253 ntBASIC16.37■□□□□ 0.21
Rfc4Q99J62 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
Rfc4Q99J62 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Rfc4Q99J62 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rfc4Q99J62 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Rfc4Q99J62 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rfc4Q99J62 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Rfc4Q99J62 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Rfc4Q99J62 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rfc4Q99J62 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rfc4Q99J62 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rfc4Q99J62 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Rfc4Q99J62 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rfc4Q99J62 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC16.36■□□□□ 0.21
Rfc4Q99J62 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Rfc4Q99J62 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rfc4Q99J62 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Rfc4Q99J62 Gm6244-201ENSMUST00000178732 841 ntBASIC16.36■□□□□ 0.21
Rfc4Q99J62 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC16.36■□□□□ 0.21
Rfc4Q99J62 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Rfc4Q99J62 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Rfc4Q99J62 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC16.36■□□□□ 0.21
Rfc4Q99J62 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rfc4Q99J62 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rfc4Q99J62 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rfc4Q99J62 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC16.36■□□□□ 0.21
Rfc4Q99J62 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Rfc4Q99J62 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rfc4Q99J62 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Rfc4Q99J62 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Rfc4Q99J62 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Rfc4Q99J62 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rfc4Q99J62 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Rfc4Q99J62 Gm42632-201ENSMUST00000201707 2411 ntBASIC16.35■□□□□ 0.21
Rfc4Q99J62 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rfc4Q99J62 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rfc4Q99J62 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rfc4Q99J62 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rfc4Q99J62 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Rfc4Q99J62 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Rfc4Q99J62 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Rfc4Q99J62 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC16.35■□□□□ 0.21
Rfc4Q99J62 Mir1894-201ENSMUST00000122802 81 ntBASIC16.35■□□□□ 0.21
Rfc4Q99J62 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Rfc4Q99J62 Gm27839-201ENSMUST00000184242 106 ntBASIC16.35■□□□□ 0.21
Rfc4Q99J62 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Rfc4Q99J62 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC16.35■□□□□ 0.21
Rfc4Q99J62 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Rfc4Q99J62 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC16.35■□□□□ 0.21
Rfc4Q99J62 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC16.35■□□□□ 0.21
Rfc4Q99J62 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rfc4Q99J62 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC16.35■□□□□ 0.21
Rfc4Q99J62 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rfc4Q99J62 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Rfc4Q99J62 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rfc4Q99J62 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rfc4Q99J62 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Rfc4Q99J62 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rfc4Q99J62 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rfc4Q99J62 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC16.35■□□□□ 0.21
Rfc4Q99J62 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rfc4Q99J62 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rfc4Q99J62 Gm9816-201ENSMUST00000122292 1414 ntBASIC16.35■□□□□ 0.21
Rfc4Q99J62 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rfc4Q99J62 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Rfc4Q99J62 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rfc4Q99J62 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC16.35■□□□□ 0.21
Rfc4Q99J62 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rfc4Q99J62 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rfc4Q99J62 Carlr-201ENSMUST00000181515 2574 ntBASIC16.34■□□□□ 0.21
Rfc4Q99J62 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rfc4Q99J62 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rfc4Q99J62 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rfc4Q99J62 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Rfc4Q99J62 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rfc4Q99J62 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rfc4Q99J62 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rfc4Q99J62 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC16.34■□□□□ 0.21
Rfc4Q99J62 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
Rfc4Q99J62 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rfc4Q99J62 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rfc4Q99J62 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rfc4Q99J62 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rfc4Q99J62 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rfc4Q99J62 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rfc4Q99J62 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rfc4Q99J62 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rfc4Q99J62 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Rfc4Q99J62 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rfc4Q99J62 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Rfc4Q99J62 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rfc4Q99J62 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rfc4Q99J62 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC16.34■□□□□ 0.21
Rfc4Q99J62 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms