Protein–RNA interactions for Protein: Q923P0

Col20a1, Collagen alpha-1(XX) chain, mousemouse

Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col20a1Q923P0 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Col20a1Q923P0 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC16.77■□□□□ 0.28
Col20a1Q923P0 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC16.77■□□□□ 0.28
Col20a1Q923P0 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Col20a1Q923P0 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC16.77■□□□□ 0.28
Col20a1Q923P0 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC16.77■□□□□ 0.28
Col20a1Q923P0 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Col20a1Q923P0 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Col20a1Q923P0 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Col20a1Q923P0 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC16.77■□□□□ 0.28
Col20a1Q923P0 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Col20a1Q923P0 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.28
Col20a1Q923P0 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Col20a1Q923P0 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Col20a1Q923P0 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Col20a1Q923P0 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Col20a1Q923P0 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC16.77■□□□□ 0.27
Col20a1Q923P0 Gm44645-201ENSMUST00000205492 1653 ntBASIC16.77■□□□□ 0.27
Col20a1Q923P0 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
Col20a1Q923P0 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Col20a1Q923P0 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Col20a1Q923P0 Gm12091-201ENSMUST00000146791 830 ntBASIC16.76■□□□□ 0.27
Col20a1Q923P0 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC16.76■□□□□ 0.27
Col20a1Q923P0 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Col20a1Q923P0 Gm17795-201ENSMUST00000214505 757 ntBASIC16.76■□□□□ 0.27
Col20a1Q923P0 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC16.76■□□□□ 0.27
Col20a1Q923P0 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC16.76■□□□□ 0.27
Col20a1Q923P0 Gm44981-201ENSMUST00000205549 1943 ntBASIC16.76■□□□□ 0.27
Col20a1Q923P0 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Col20a1Q923P0 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Col20a1Q923P0 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Col20a1Q923P0 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Col20a1Q923P0 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Col20a1Q923P0 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Col20a1Q923P0 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Col20a1Q923P0 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Col20a1Q923P0 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Col20a1Q923P0 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
Col20a1Q923P0 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Col20a1Q923P0 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC16.76■□□□□ 0.27
Col20a1Q923P0 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Col20a1Q923P0 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Col20a1Q923P0 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Col20a1Q923P0 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Col20a1Q923P0 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Col20a1Q923P0 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Col20a1Q923P0 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Col20a1Q923P0 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Col20a1Q923P0 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC16.75■□□□□ 0.27
Col20a1Q923P0 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Col20a1Q923P0 Gm5279-201ENSMUST00000199575 745 ntBASIC16.75■□□□□ 0.27
Col20a1Q923P0 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC16.75■□□□□ 0.27
Col20a1Q923P0 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Col20a1Q923P0 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Col20a1Q923P0 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Col20a1Q923P0 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Col20a1Q923P0 Fbxl12-205ENSMUST00000140702 1555 ntBASIC16.75■□□□□ 0.27
Col20a1Q923P0 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC16.75■□□□□ 0.27
Col20a1Q923P0 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Col20a1Q923P0 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Col20a1Q923P0 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Col20a1Q923P0 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Col20a1Q923P0 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Col20a1Q923P0 Gm42690-201ENSMUST00000197921 1836 ntBASIC16.75■□□□□ 0.27
Col20a1Q923P0 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Col20a1Q923P0 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Col20a1Q923P0 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Col20a1Q923P0 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Col20a1Q923P0 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Col20a1Q923P0 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC16.74■□□□□ 0.27
Col20a1Q923P0 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Col20a1Q923P0 Gm6912-201ENSMUST00000117218 544 ntBASIC16.74■□□□□ 0.27
Col20a1Q923P0 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Col20a1Q923P0 AC155286.1-201ENSMUST00000218632 448 ntBASIC16.74■□□□□ 0.27
Col20a1Q923P0 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Col20a1Q923P0 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
Col20a1Q923P0 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Col20a1Q923P0 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Col20a1Q923P0 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Col20a1Q923P0 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Col20a1Q923P0 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Col20a1Q923P0 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Col20a1Q923P0 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Col20a1Q923P0 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC16.74■□□□□ 0.27
Col20a1Q923P0 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Col20a1Q923P0 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Col20a1Q923P0 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC16.74■□□□□ 0.27
Col20a1Q923P0 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Col20a1Q923P0 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Col20a1Q923P0 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Col20a1Q923P0 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Col20a1Q923P0 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Col20a1Q923P0 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC16.74■□□□□ 0.27
Col20a1Q923P0 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Col20a1Q923P0 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Col20a1Q923P0 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Col20a1Q923P0 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Col20a1Q923P0 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Col20a1Q923P0 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Col20a1Q923P0 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 64.7 ms