Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdhb1Q91Y08 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdhb1Q91Y08 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhb1Q91Y08 AC121801.1-201ENSMUST00000225363 1899 ntBASIC14.82□□□□□ -0.04
Pcdhb1Q91Y08 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhb1Q91Y08 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhb1Q91Y08 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhb1Q91Y08 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhb1Q91Y08 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhb1Q91Y08 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhb1Q91Y08 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhb1Q91Y08 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhb1Q91Y08 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhb1Q91Y08 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhb1Q91Y08 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhb1Q91Y08 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhb1Q91Y08 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC14.82□□□□□ -0.04
Pcdhb1Q91Y08 Gm15957-201ENSMUST00000118893 974 ntBASIC14.82□□□□□ -0.04
Pcdhb1Q91Y08 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhb1Q91Y08 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC14.82□□□□□ -0.04
Pcdhb1Q91Y08 AC121598.1-201ENSMUST00000228224 1019 ntBASIC14.82□□□□□ -0.04
Pcdhb1Q91Y08 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhb1Q91Y08 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhb1Q91Y08 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhb1Q91Y08 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhb1Q91Y08 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Pcdhb1Q91Y08 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
Pcdhb1Q91Y08 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhb1Q91Y08 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhb1Q91Y08 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhb1Q91Y08 Gm26513-201ENSMUST00000181802 2489 ntBASIC14.82□□□□□ -0.04
Pcdhb1Q91Y08 Gm28182-201ENSMUST00000188354 2477 ntBASIC14.82□□□□□ -0.04
Pcdhb1Q91Y08 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC14.82□□□□□ -0.04
Pcdhb1Q91Y08 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhb1Q91Y08 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Pcdhb1Q91Y08 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhb1Q91Y08 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhb1Q91Y08 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhb1Q91Y08 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhb1Q91Y08 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhb1Q91Y08 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Pcdhb1Q91Y08 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Pcdhb1Q91Y08 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhb1Q91Y08 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhb1Q91Y08 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhb1Q91Y08 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhb1Q91Y08 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhb1Q91Y08 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhb1Q91Y08 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhb1Q91Y08 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhb1Q91Y08 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhb1Q91Y08 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhb1Q91Y08 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhb1Q91Y08 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Pcdhb1Q91Y08 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC14.81□□□□□ -0.04
Pcdhb1Q91Y08 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC14.81□□□□□ -0.04
Pcdhb1Q91Y08 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC14.81□□□□□ -0.04
Pcdhb1Q91Y08 Gm27702-201ENSMUST00000184512 56 ntBASIC14.81□□□□□ -0.04
Pcdhb1Q91Y08 AA619741-201ENSMUST00000195095 646 ntBASIC14.81□□□□□ -0.04
Pcdhb1Q91Y08 AC151286.1-201ENSMUST00000198489 145 ntBASIC14.81□□□□□ -0.04
Pcdhb1Q91Y08 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhb1Q91Y08 Gm44608-201ENSMUST00000206827 855 ntBASIC14.81□□□□□ -0.04
Pcdhb1Q91Y08 AC131690.1-201ENSMUST00000218406 374 ntBASIC14.81□□□□□ -0.04
Pcdhb1Q91Y08 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhb1Q91Y08 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhb1Q91Y08 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Pcdhb1Q91Y08 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Pcdhb1Q91Y08 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Pcdhb1Q91Y08 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhb1Q91Y08 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhb1Q91Y08 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhb1Q91Y08 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhb1Q91Y08 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhb1Q91Y08 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhb1Q91Y08 BC001981-202ENSMUST00000191393 1545 ntBASIC14.81□□□□□ -0.04
Pcdhb1Q91Y08 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhb1Q91Y08 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Pcdhb1Q91Y08 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhb1Q91Y08 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhb1Q91Y08 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhb1Q91Y08 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdhb1Q91Y08 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdhb1Q91Y08 AC166574.6-201ENSMUST00000227889 1806 ntBASIC14.8□□□□□ -0.04
Pcdhb1Q91Y08 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC14.8□□□□□ -0.04
Pcdhb1Q91Y08 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdhb1Q91Y08 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC14.8□□□□□ -0.04
Pcdhb1Q91Y08 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdhb1Q91Y08 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdhb1Q91Y08 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Pcdhb1Q91Y08 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdhb1Q91Y08 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdhb1Q91Y08 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdhb1Q91Y08 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC14.8□□□□□ -0.04
Pcdhb1Q91Y08 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Pcdhb1Q91Y08 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Pcdhb1Q91Y08 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdhb1Q91Y08 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdhb1Q91Y08 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Pcdhb1Q91Y08 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Pcdhb1Q91Y08 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC14.8□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 60.2 ms