Protein–RNA interactions for Protein: Q91XZ6

Pcdhb4, Protocadherin beta 4, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb4Q91XZ6 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Pcdhb4Q91XZ6 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC14.18□□□□□ -0.14
Pcdhb4Q91XZ6 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhb4Q91XZ6 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhb4Q91XZ6 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Pcdhb4Q91XZ6 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC14.18□□□□□ -0.14
Pcdhb4Q91XZ6 Gm12260-201ENSMUST00000122447 411 ntBASIC14.18□□□□□ -0.14
Pcdhb4Q91XZ6 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC14.18□□□□□ -0.14
Pcdhb4Q91XZ6 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC14.18□□□□□ -0.14
Pcdhb4Q91XZ6 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhb4Q91XZ6 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC14.18□□□□□ -0.14
Pcdhb4Q91XZ6 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC14.18□□□□□ -0.14
Pcdhb4Q91XZ6 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC14.18□□□□□ -0.14
Pcdhb4Q91XZ6 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhb4Q91XZ6 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhb4Q91XZ6 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhb4Q91XZ6 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhb4Q91XZ6 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhb4Q91XZ6 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Pcdhb4Q91XZ6 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Pcdhb4Q91XZ6 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC14.18□□□□□ -0.14
Pcdhb4Q91XZ6 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Pcdhb4Q91XZ6 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhb4Q91XZ6 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhb4Q91XZ6 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhb4Q91XZ6 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhb4Q91XZ6 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC14.18□□□□□ -0.14
Pcdhb4Q91XZ6 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhb4Q91XZ6 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhb4Q91XZ6 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdhb4Q91XZ6 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC14.17□□□□□ -0.14
Pcdhb4Q91XZ6 Gm45638-201ENSMUST00000211507 2878 ntBASIC14.17□□□□□ -0.14
Pcdhb4Q91XZ6 Gm42769-201ENSMUST00000198576 1659 ntBASIC14.17□□□□□ -0.14
Pcdhb4Q91XZ6 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdhb4Q91XZ6 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdhb4Q91XZ6 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Pcdhb4Q91XZ6 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdhb4Q91XZ6 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdhb4Q91XZ6 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdhb4Q91XZ6 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdhb4Q91XZ6 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdhb4Q91XZ6 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC14.17□□□□□ -0.14
Pcdhb4Q91XZ6 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC14.17□□□□□ -0.14
Pcdhb4Q91XZ6 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC14.17□□□□□ -0.14
Pcdhb4Q91XZ6 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdhb4Q91XZ6 Gm9182-201ENSMUST00000217829 639 ntBASIC14.17□□□□□ -0.14
Pcdhb4Q91XZ6 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdhb4Q91XZ6 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdhb4Q91XZ6 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdhb4Q91XZ6 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdhb4Q91XZ6 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Pcdhb4Q91XZ6 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdhb4Q91XZ6 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdhb4Q91XZ6 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdhb4Q91XZ6 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdhb4Q91XZ6 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdhb4Q91XZ6 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
Pcdhb4Q91XZ6 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdhb4Q91XZ6 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdhb4Q91XZ6 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Pcdhb4Q91XZ6 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdhb4Q91XZ6 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdhb4Q91XZ6 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Pcdhb4Q91XZ6 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdhb4Q91XZ6 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdhb4Q91XZ6 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdhb4Q91XZ6 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdhb4Q91XZ6 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdhb4Q91XZ6 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdhb4Q91XZ6 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdhb4Q91XZ6 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdhb4Q91XZ6 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdhb4Q91XZ6 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdhb4Q91XZ6 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdhb4Q91XZ6 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdhb4Q91XZ6 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdhb4Q91XZ6 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdhb4Q91XZ6 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdhb4Q91XZ6 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
Pcdhb4Q91XZ6 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdhb4Q91XZ6 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Pcdhb4Q91XZ6 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC14.16□□□□□ -0.14
Pcdhb4Q91XZ6 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdhb4Q91XZ6 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC14.16□□□□□ -0.14
Pcdhb4Q91XZ6 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC14.16□□□□□ -0.14
Pcdhb4Q91XZ6 Gm15483-201ENSMUST00000120338 456 ntBASIC14.16□□□□□ -0.14
Pcdhb4Q91XZ6 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Pcdhb4Q91XZ6 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
Pcdhb4Q91XZ6 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdhb4Q91XZ6 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC14.16□□□□□ -0.14
Pcdhb4Q91XZ6 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
Pcdhb4Q91XZ6 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Pcdhb4Q91XZ6 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC14.16□□□□□ -0.14
Pcdhb4Q91XZ6 Mir8117-201ENSMUST00000184773 107 ntBASIC14.16□□□□□ -0.14
Pcdhb4Q91XZ6 Gm45098-201ENSMUST00000207179 657 ntBASIC14.16□□□□□ -0.14
Pcdhb4Q91XZ6 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdhb4Q91XZ6 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdhb4Q91XZ6 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdhb4Q91XZ6 AC090659.1-201ENSMUST00000224334 768 ntBASIC14.16□□□□□ -0.14
Pcdhb4Q91XZ6 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms